BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0001[412022] (23 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0002[412022] (37 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0008[412022] (277 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0009[412022] (87 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0010[412022] (136 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0011[412022] (466 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0012[412022] (280 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0013[412022] (109 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0014[412022] (183 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0015[412022] (707 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000352308 pep:novel chromosome:NCBI36:17:59205299:59250408... 52 3e-06 ENSP00000374575 pep:known-ccds chromosome:NCBI36:17:59218142:592... 51 4e-06 ENSP00000374573 pep:known-ccds chromosome:NCBI36:17:59218142:592... 51 4e-06 ENSP00000374574 pep:known-ccds chromosome:NCBI36:17:59218142:592... 51 4e-06 ENSP00000350168 pep:known-ccds chromosome:NCBI36:5:55069609:5514... 50 1e-05 ENSP00000347087 pep:known-ccds chromosome:NCBI36:5:55069609:5514... 50 1e-05 ENSP00000334167 pep:known chromosome:NCBI36:5:55069609:55148362:... 50 1e-05 ENSP00000269349 pep:known-ccds chromosome:NCBI36:17:75723614:757... 49 1e-05 ENSP00000346120 pep:known-ccds chromosome:NCBI36:10:70385890:704... 49 2e-05 ENSP00000293831 pep:known-ccds chromosome:NCBI36:17:7416884:7423... 49 2e-05 ENSP00000369881 pep:known-ccds chromosome:NCBI36:17:7416748:7423... 49 2e-05 ENSP00000326381 pep:known-ccds chromosome:NCBI36:3:187984060:187... 49 2e-05 ENSP00000216019 pep:known-ccds chromosome:NCBI36:22:37209389:372... 49 2e-05 ENSP00000267430 pep:known-ccds chromosome:NCBI36:14:44674900:447... 47 6e-05 ENSP00000348925 pep:known chromosome:NCBI36:3:187984060:18799037... 47 6e-05 >ENSP00000352308 pep:novel chromosome:NCBI36:17:59205299:59250408:1 gene:ENSG00000198231 transcript:ENST00000359353 Length = 938 Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 19/171 (11%) Query: 415 RKMRQVVFVSATPADYEQRVSGQTAEQVVRPTGLVDPQI-EVRPASTQVDDVL------- 466 R RQ + SAT + +++ + ++ P +V I E TQ+ ++L Sbjct: 429 RPDRQTLLFSAT---FRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKW 485 Query: 467 SEITERV---KANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 + +T R+ ++ VL+ V K AE+L L G + LH D+D ER ++I D + Sbjct: 486 NWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFK 545 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 574 VLV ++ GLDIP + V D ++ R IGR R Sbjct: 546 KKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHR-----IGRTGR 591 >ENSP00000374575 pep:known-ccds chromosome:NCBI36:17:59218142:59249490:1 gene:ENSG00000198231 transcript:ENST00000389925 CCDS32704.1 Length = 938 Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 19/171 (11%) Query: 415 RKMRQVVFVSATPADYEQRVSGQTAEQVVRPTGLVDPQI-EVRPASTQVDDVL------- 466 R RQ + SAT + +++ + ++ P +V I E TQ+ ++L Sbjct: 429 RPDRQTLLFSAT---FRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKW 485 Query: 467 SEITERV---KANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 + +T R+ ++ VL+ V K AE+L L G + LH D+D ER ++I D + Sbjct: 486 NWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFK 545 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 574 VLV ++ GLDIP + V D ++ R IGR R Sbjct: 546 KKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHR-----IGRTGR 591 >ENSP00000374573 pep:known-ccds chromosome:NCBI36:17:59218142:59249490:1 gene:ENSG00000198231 transcript:ENST00000389923 CCDS32704.1 Length = 938 Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 19/171 (11%) Query: 415 RKMRQVVFVSATPADYEQRVSGQTAEQVVRPTGLVDPQI-EVRPASTQVDDVL------- 466 R RQ + SAT + +++ + ++ P +V I E TQ+ ++L Sbjct: 429 RPDRQTLLFSAT---FRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKW 485 Query: 467 SEITERV---KANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 + +T R+ ++ VL+ V K AE+L L G + LH D+D ER ++I D + Sbjct: 486 NWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFK 545 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 574 VLV ++ GLDIP + V D ++ R IGR R Sbjct: 546 KKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHR-----IGRTGR 591 >ENSP00000374574 pep:known-ccds chromosome:NCBI36:17:59218142:59249490:1 gene:ENSG00000198231 transcript:ENST00000389924 CCDS32704.1 Length = 938 Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 19/171 (11%) Query: 415 RKMRQVVFVSATPADYEQRVSGQTAEQVVRPTGLVDPQI-EVRPASTQVDDVL------- 466 R RQ + SAT + +++ + ++ P +V I E TQ+ ++L Sbjct: 429 RPDRQTLLFSAT---FRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKW 485 Query: 467 SEITERV---KANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 + +T R+ ++ VL+ V K AE+L L G + LH D+D ER ++I D + Sbjct: 486 NWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFK 545 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 574 VLV ++ GLDIP + V D ++ R IGR R Sbjct: 546 KKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHR-----IGRTGR 591 >ENSP00000350168 pep:known-ccds chromosome:NCBI36:5:55069609:55148362:1 gene:ENSG00000152670 transcript:ENST00000357557 CCDS3969.1 Length = 724 Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 466 LSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLG 525 L EI + +ER ++ V TK+ A+ + FL + +H D + ER + + D R G Sbjct: 531 LVEILRNI-GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFG 589 Query: 526 TFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVN-GKALLYA 584 VLV ++ GLDI V V D + IGR R N G+A+ + Sbjct: 590 KCPVLVATSVAARGLDIENVQHVINFD-----LPSTIDEYVHRIGRTGRCGNTGRAISFF 644 Query: 585 DRITDS 590 D +D+ Sbjct: 645 DLESDN 650 >ENSP00000347087 pep:known-ccds chromosome:NCBI36:5:55069609:55148362:1 gene:ENSG00000152670 transcript:ENST00000354991 CCDS3969.1 Length = 724 Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 466 LSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLG 525 L EI + +ER ++ V TK+ A+ + FL + +H D + ER + + D R G Sbjct: 531 LVEILRNI-GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFG 589 Query: 526 TFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVN-GKALLYA 584 VLV ++ GLDI V V D + IGR R N G+A+ + Sbjct: 590 KCPVLVATSVAARGLDIENVQHVINFD-----LPSTIDEYVHRIGRTGRCGNTGRAISFF 644 Query: 585 DRITDS 590 D +D+ Sbjct: 645 DLESDN 650 >ENSP00000334167 pep:known chromosome:NCBI36:5:55069609:55148362:1 gene:ENSG00000152670 transcript:ENST00000353507 Length = 690 Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 466 LSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLG 525 L EI + +ER ++ V TK+ A+ + FL + +H D + ER + + D R G Sbjct: 497 LVEILRNI-GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFG 555 Query: 526 TFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVN-GKALLYA 584 VLV ++ GLDI V V D + IGR R N G+A+ + Sbjct: 556 KCPVLVATSVAARGLDIENVQHVINFD-----LPSTIDEYVHRIGRTGRCGNTGRAISFF 610 Query: 585 DRITDS 590 D +D+ Sbjct: 611 DLESDN 616 >ENSP00000269349 pep:known-ccds chromosome:NCBI36:17:75723614:75735533:-1 gene:ENSG00000141543 transcript:ENST00000269349 CCDS11767.1 Length = 411 Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%) Query: 464 DVLSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 D L ++ + + + V I TKR + LTE + + V +H D+ ER I+++ R Sbjct: 266 DTLCDLYDTLTITQAV-IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSL-IQTIGRAAR 574 G VL+ ++ GLD+P+VSL+ D L R L I IGR+ R Sbjct: 325 SGASRVLISTDVWARGLDVPQVSLIINYD------LPNNRELYIHRIGRSGR 370 >ENSP00000346120 pep:known-ccds chromosome:NCBI36:10:70385890:70414835:1 gene:ENSG00000165732 transcript:ENST00000354185 CCDS31211.1 Length = 783 Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 16/143 (11%) Query: 419 QVVFVSATPADYEQRVSGQ----TAEQV------VRPTGLVDPQIEVRPASTQVDDVLSE 468 Q + SAT + V+ + T EQV + T + + ++ TQ V+ + Sbjct: 370 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGD 429 Query: 469 ITERVKANE-RVLITVLTKRMAEQLTEFLADHGVK--VRYLHSDIDTVERVEIIRDLRLG 525 + ++ R +I TK+ A++L++ + +K + LH DI +R ++ R G Sbjct: 430 VIRVYSGHQGRTIIFCETKKEAQELSQ---NSAIKQDAQSLHGDIPQKQREITLKGFRNG 486 Query: 526 TFDVLVGINLLREGLDIPEVSLV 548 +F VLV N+ GLDIPEV LV Sbjct: 487 SFGVLVATNVAARGLDIPEVDLV 509 >ENSP00000293831 pep:known-ccds chromosome:NCBI36:17:7416884:7423029:1 gene:ENSG00000161960 transcript:ENST00000293831 CCDS11113.1 Length = 406 Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 464 DVLSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 D L ++ E + + V I + T+R + LTE + V +H D+D ER I+R+ R Sbjct: 261 DTLCDLYETLTITQAV-IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFR 319 Query: 524 LGTFDVLVGINLLREGLDIPEVSLV 548 G+ VL+ +LL G+D+ +VSLV Sbjct: 320 SGSSRVLITTDLLARGIDVQQVSLV 344 >ENSP00000369881 pep:known-ccds chromosome:NCBI36:17:7416748:7423048:1 gene:ENSG00000161960 transcript:ENST00000380512 CCDS11113.1 Length = 406 Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 464 DVLSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 D L ++ E + + V I + T+R + LTE + V +H D+D ER I+R+ R Sbjct: 261 DTLCDLYETLTITQAV-IFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFR 319 Query: 524 LGTFDVLVGINLLREGLDIPEVSLV 548 G+ VL+ +LL G+D+ +VSLV Sbjct: 320 SGSSRVLITTDLLARGIDVQQVSLV 344 >ENSP00000326381 pep:known-ccds chromosome:NCBI36:3:187984060:187990377:1 gene:ENSG00000156976 transcript:ENST00000323963 CCDS3282.1 Length = 407 Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Query: 464 DVLSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 D L ++ E + + V I + T+R + LTE + V LH D+D ER I+R+ R Sbjct: 262 DTLCDLYETLTITQAV-IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFR 320 Query: 524 LGTFDVLVGINLLREGLDIPEVSLV 548 G+ VL+ +LL G+D+ +VSLV Sbjct: 321 SGSSRVLITTDLLARGIDVQQVSLV 345 >ENSP00000216019 pep:known-ccds chromosome:NCBI36:22:37209389:37232262:-1 gene:ENSG00000100201 transcript:ENST00000216019 CCDS33646.1 Length = 729 Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 7/120 (5%) Query: 460 TQVDDVLSEITERVKANE--RVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVE 517 ++ D L ++ E + A + + +I V TKR + LT + G +H D ER Sbjct: 400 SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDW 459 Query: 518 IIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVN 577 ++ + R G +L+ ++ GLD+ +V V D + + + IGR AR+ N Sbjct: 460 VLNEFRSGKAPILIATDVASRGLDVEDVKFVINYD-----YPNSSEDYVHRIGRTARSTN 514 >ENSP00000267430 pep:known-ccds chromosome:NCBI36:14:44674900:44739835:1 gene:ENSG00000187790 transcript:ENST00000267430 CCDS32070.1 Length = 2048 Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 15/123 (12%) Query: 470 TERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYL----HSDIDTV------ERVEII 519 TE+ + RV+I + +++ E L+ H +R + H+ + E++E++ Sbjct: 470 TEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVV 529 Query: 520 RDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVNGK 579 + R G ++ LV + EGLDI EV L+ D+ K L+Q +GR R G+ Sbjct: 530 KQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPI-----RLVQRMGRTGRKRQGR 584 Query: 580 ALL 582 ++ Sbjct: 585 IVI 587 >ENSP00000348925 pep:known chromosome:NCBI36:3:187984060:187990377:1 gene:ENSG00000156976 transcript:ENST00000356531 Length = 312 Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%) Query: 464 DVLSEITERVKANERVLITVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVERVEIIRDLR 523 D L ++ E + + V I + T+R + LTE + V LH D+D ER I+R+ R Sbjct: 167 DTLCDLYETLTITQAV-IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFR 225 Query: 524 LGTFDVLVGINLLREGLDIPEVSLVAILD--ADKEGFL 559 G+ VL+ +LL G+D+ +VSLV D ++E ++ Sbjct: 226 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI 263 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0016[412022] (399 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000245206 pep:known-ccds chromosome:NCBI36:16:57298538:573... 320 1e-87 ENSP00000359539 pep:known-ccds chromosome:NCBI36:10:101146648:10... 288 7e-78 ENSP00000303077 pep:known chromosome:NCBI36:8:37910962:37916804:... 144 1e-34 >ENSP00000245206 pep:known-ccds chromosome:NCBI36:16:57298538:57325747:-1 gene:ENSG00000125166 transcript:ENST00000245206 CCDS10801.1 Length = 430 Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 169/398 (42%), Positives = 230/398 (57%), Gaps = 2/398 (0%) Query: 4 FSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGL 63 ++ VE+ P DPILG+ EAF DT K+NLGVG Y +++GK +L +VR AE L Sbjct: 33 WTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNL 92 Query: 64 PRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFL-RTLNPK 122 + YLPI G+A + + +L LG++S ++ +GR VT Q + GTGAL+IGA FL R Sbjct: 93 DKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFS 152 Query: 123 AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHAC 182 V + P+W NH +F AG ++ Y YYD KT G +F G + ++ ++++LHAC Sbjct: 153 RDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHAC 212 Query: 183 CHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESI-EXXXXXXXXXXXXNLNXX 241 HNPTGVD QW ++ VVK R L F D+AYQGF + +N Sbjct: 213 AHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVC 272 Query: 242 XXXXXXXXXXLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLA 301 LYGERVGA +++ DEA RV SQLK +IR YSNPP +G I AA+L Sbjct: 273 LCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILN 332 Query: 302 SPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVD 361 +P+LR W+QE+ M DRI MR LV LK G ++ I Q GMF ++GL QV+ Sbjct: 333 TPDLRKQWLQEVKVMADRIIGMRTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVE 392 Query: 362 RLREEFGIYAVSTGRICVAALNTRNLDVVANAIAAVLK 399 RL +EF IY GRI VA + + N+ +A+AI V K Sbjct: 393 RLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQVTK 430 >ENSP00000359539 pep:known-ccds chromosome:NCBI36:10:101146648:101180403:-1 gene:ENSG00000120053 transcript:ENST00000370508 CCDS7479.1 Length = 413 Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 163/401 (40%), Positives = 220/401 (54%), Gaps = 8/401 (1%) Query: 2 SLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAE-KARVE 60 S+F+ V A + L F D P KVNLGVG Y +D +L V+ E K + Sbjct: 5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIAND 64 Query: 61 AGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLR--- 117 L YLPI G+A + + +L LGDDSP + RV Q+LGGTGAL+IGADFL Sbjct: 65 NSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWY 124 Query: 118 --TLNPKAKVAISDPSWENHRALFDMAGF-EVVAYPYYDAKTNGVNFDGMLAALNGYEPG 174 T N V +S P+WENH A+F AGF ++ +Y Y+DA+ G++ G L L Sbjct: 125 NGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEF 184 Query: 175 TIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGE-SIEXXXXXXXXX 233 +IVVLHAC HNPTG+D QW Q+ V+K R L PF D AYQGF ++E Sbjct: 185 SIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYF 244 Query: 234 XXXNLNXXXXXXXXXXXXLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGG 293 LY ERVG L+++ + +VLSQ+++++R +SNPP G Sbjct: 245 VSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGA 304 Query: 294 AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYS 353 IVA+ L++PEL W + M DRI MR+ L RL+A ++ I Q GMFS++ Sbjct: 305 RIVASTLSNPELFEEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSFT 364 Query: 354 GLTSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 394 GL QV+ L E IY + +GRI V+ L T+NLD VA +I Sbjct: 365 GLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSI 405 >ENSP00000303077 pep:known chromosome:NCBI36:8:37910962:37916804:-1 gene:ENSG00000169154 transcript:ENST00000307599 Length = 420 Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/398 (25%), Positives = 175/398 (43%), Gaps = 11/398 (2%) Query: 1 MSLFSAVELAPRDPILG-LNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARV 59 +S+F V LA + + G L + + D P K+ L V +G P + V + ++ Sbjct: 4 LSVFMDVPLAHK--LEGSLLKTYKQDDYPNKIFLAYRVCMTNEGH-PWVSLVVQKTRLQI 60 Query: 60 --EAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLR 117 + L YLP G+ ++ + LL G S I RV +G +GA ++G FLR Sbjct: 61 SQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQLGVQFLR 120 Query: 118 TLNPKAKVA-ISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTI 176 + A++ I E H +F GF V Y +D K ++ D +L + G + Sbjct: 121 AWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVEQIPHGCV 180 Query: 177 VVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEXXXXXXXXXXXX 236 +V+ N L + WA+++ ++K++++ PF DI QG S Sbjct: 181 LVMG----NIIDCKLTPSGWAKLMSMIKSKQIFPFFDIPCQGLYTSDLEEDTRILYFVSQ 236 Query: 237 NLNXXXXXXXXXXXXLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIV 296 +Y E VG L ++ + + VLSQL+ + + + NPP G ++ Sbjct: 237 GFEFFCSQSLSKNFGIYDEGVGMLVVVAVNNQQLLCVLSQLEGLAQALWLNPPNTGARVI 296 Query: 297 AAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT 356 ++L +P L W Q L E+ + I + + E+L+ G + I Q G Y GL Sbjct: 297 TSILCNPALLGEWKQSLKEVVENIMLTKEKVKEKLQLLGTPGSWGHITEQSGTHGYLGLN 356 Query: 357 SAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 394 S QV+ L + IY G+I + +N N++ + I Sbjct: 357 SQQVEYLVRKKHIYIPKNGQINFSCINANNINYITEGI 394 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0017[412022] (497 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0018[412022] (262 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000363794 pep:known-ccds chromosome:NCBI36:6:33280397:3328... 94 1e-19 ENSP00000230236 pep:known chromosome:NCBI36:c6_QBL:33244098:3324... 94 1e-19 ENSP00000303525 pep:known-ccds chromosome:NCBI36:4:170145319:170... 86 5e-17 ENSP00000353917 pep:novel chromosome:NCBI36:4:170145319:17016799... 84 2e-16 ENSP00000256216 pep:known-ccds chromosome:NCBI36:5:118816103:118... 79 5e-15 ENSP00000372558 pep:novel chromosome:NCBI36:c6_COX:33241150:3324... 79 6e-15 ENSP00000326219 pep:known-ccds chromosome:NCBI36:14:23492805:235... 78 8e-15 ENSP00000296522 pep:known-ccds chromosome:NCBI36:4:175647958:175... 78 9e-15 ENSP00000296424 pep:known-ccds chromosome:NCBI36:4:104218232:104... 74 1e-13 ENSP00000373629 pep:known-ccds chromosome:NCBI36:2:216612243:216... 73 3e-13 ENSP00000373632 pep:known-ccds chromosome:NCBI36:2:216612243:216... 73 3e-13 ENSP00000320352 pep:known-ccds chromosome:NCBI36:17:20970850:210... 73 3e-13 ENSP00000351035 pep:known-ccds chromosome:NCBI36:4:88476790:8853... 72 5e-13 ENSP00000333300 pep:known-ccds chromosome:NCBI36:4:88443965:8846... 72 6e-13 ENSP00000261494 pep:known chromosome:NCBI36:17:20970850:21035428... 72 6e-13 ENSP00000265322 pep:known chromosome:NCBI36:2:216611357:21665470... 71 1e-12 ENSP00000220764 pep:known-ccds chromosome:NCBI36:8:91082756:9113... 66 4e-11 ENSP00000327975 pep:known chromosome:NCBI36:17:9615536:9635371:-... 65 6e-11 ENSP00000219481 pep:known-ccds chromosome:NCBI36:16:391827:40246... 65 1e-10 ENSP00000296521 pep:known chromosome:NCBI36:4:175647958:17568021... 62 5e-10 ENSP00000250383 pep:known-ccds chromosome:NCBI36:14:23177081:231... 62 6e-10 ENSP00000344674 pep:known chromosome:NCBI36:14:23177081:23184686... 62 7e-10 ENSP00000168216 pep:known-ccds chromosome:NCBI36:X:53474931:5347... 61 1e-09 ENSP00000288111 pep:known-ccds chromosome:NCBI36:14:23829649:238... 60 2e-09 ENSP00000171214 pep:known-ccds chromosome:NCBI36:19:9984925:9993... 59 6e-09 ENSP00000353759 pep:known chromosome:NCBI36:14:59681255:59701900... 58 1e-08 ENSP00000216500 pep:known-ccds chromosome:NCBI36:14:59681255:597... 58 1e-08 ENSP00000334801 pep:known-ccds chromosome:NCBI36:14:23527959:235... 56 4e-08 ENSP00000263278 pep:known-ccds chromosome:NCBI36:19:54008091:540... 56 4e-08 ENSP00000251312 pep:known chromosome:NCBI36:17:32022442:32031324... 56 5e-08 ENSP00000307607 pep:known-ccds chromosome:NCBI36:8:57375122:5739... 55 7e-08 ENSP00000262542 pep:known chromosome:NCBI36:9:114196641:11427450... 55 1e-07 ENSP00000303356 pep:known-ccds chromosome:NCBI36:17:77587046:775... 54 1e-07 ENSP00000312939 pep:known-ccds chromosome:NCBI36:18:59148813:591... 54 1e-07 ENSP00000372203 pep:known chromosome:NCBI36:14:23527959:23545444... 53 4e-07 ENSP00000364453 pep:known-ccds chromosome:NCBI36:X:53474931:5347... 47 1e-05 ENSP00000364412 pep:known-ccds chromosome:NCBI36:9:98037409:9810... 47 2e-05 ENSP00000225929 pep:known-ccds chromosome:NCBI36:17:37954758:379... 45 9e-05 >ENSP00000363794 pep:known-ccds chromosome:NCBI36:6:33280397:33282586:1 gene:ENSG00000204228 transcript:ENST00000374662 CCDS4769.1 Length = 261 Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 20/269 (7%) Query: 1 MTSNLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAG----- 55 + + L A+VTGA SGIG+ + ++ A L+ G Sbjct: 5 LQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 64 Query: 56 --GRAIGVAMDVTNEDAVNAGIDKVAQTFS-SVDILVSNAGIQIVNPIENYAFADWKKMQ 112 G DV+ A +++V FS ++VS AGI + + + DW K+ Sbjct: 65 PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 124 Query: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 172 A+++ G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A Sbjct: 125 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 184 Query: 173 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVED 232 +E +H +R + V PGF+ TP+ K +P++ +++ + + +G D ED Sbjct: 185 RELGRHGIRCNSVLPGFIATPMTQK-VPQKVV------DKITEMIPMGHLGD-----PED 232 Query: 233 VAKTVLFLSAFPSAALTGQSFVVSHGWFM 261 VA V FL++ S +TG S V+ G FM Sbjct: 233 VADVVAFLASEDSGYITGTSVEVTGGLFM 261 >ENSP00000230236 pep:known chromosome:NCBI36:c6_QBL:33244098:33246290:1 gene:ENSG00000112474 transcript:ENST00000230236 Length = 261 Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 20/269 (7%) Query: 1 MTSNLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAG----- 55 + + L A+VTGA SGIG+ + ++ A L+ G Sbjct: 5 LQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 64 Query: 56 --GRAIGVAMDVTNEDAVNAGIDKVAQTFS-SVDILVSNAGIQIVNPIENYAFADWKKMQ 112 G DV+ A +++V FS ++VS AGI + + + DW K+ Sbjct: 65 PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 124 Query: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 172 A+++ G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A Sbjct: 125 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 184 Query: 173 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVED 232 +E +H +R + V PGF+ TP+ K +P++ +++ + + +G D ED Sbjct: 185 RELGRHGIRCNSVLPGFIATPMTQK-VPQKVV------DKITEMIPMGHLGD-----PED 232 Query: 233 VAKTVLFLSAFPSAALTGQSFVVSHGWFM 261 VA V FL++ S +TG S V+ G FM Sbjct: 233 VADVVAFLASEDSGYITGTSVEVTGGLFM 261 >ENSP00000303525 pep:known-ccds chromosome:NCBI36:4:170145319:170167997:-1 gene:ENSG00000145439 transcript:ENST00000306193 CCDS3812.1 Length = 237 Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 113/252 (44%), Gaps = 21/252 (8%) Query: 8 KAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMDVTN 67 K V G + GIG+ + N +GA A A GG + + DV Sbjct: 3 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAG---DLGGDHLAFSCDVAK 59 Query: 68 EDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 127 E V +++ + V+ LV+ AGI + D ++ G+ LT KAA+ Sbjct: 60 EHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAM 119 Query: 128 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 187 + M + +GG ++ +GS+ + + +S Y +K GL+G +R LAKE A+ +R +VV P Sbjct: 120 RTMIQQ-QGGSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAP 178 Query: 188 GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFPSAA 247 GFV T + + EE + K + LG+ F +VA V+FL S Sbjct: 179 GFVHTDMTKD----------LKEEHLKKNIPLGR-----FGETIEVAHAVVFL--LESPY 221 Query: 248 LTGQSFVVSHGW 259 +TG VV G Sbjct: 222 ITGHVLVVDGGL 233 >ENSP00000353917 pep:novel chromosome:NCBI36:4:170145319:170167997:-1 gene:ENSG00000145439 transcript:ENST00000360695 Length = 237 Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 21/252 (8%) Query: 8 KAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMDVTN 67 K V G + GIG+ + N +GA A A GG + + DV Sbjct: 3 KVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAG---DLGGDHLAFSCDVAK 59 Query: 68 EDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKAAL 127 E V +++ + V+ LV+ AGI + D ++ G+ LT KAA+ Sbjct: 60 EHDVQNTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAM 119 Query: 128 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 187 + M + +GG ++ +G + + + +S Y +K GL+G +R LAKE A+ +R +VV P Sbjct: 120 RTMIQQ-QGGSIVNVGDIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAP 178 Query: 188 GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFPSAA 247 GFV T + + EE + K + LG+ F +VA V+FL S Sbjct: 179 GFVHTDMTKD----------LKEEHLKKNIPLGR-----FGETIEVAHAVVFL--LESPY 221 Query: 248 LTGQSFVVSHGW 259 +TG VV G Sbjct: 222 ITGHVLVVDGGL 233 >ENSP00000256216 pep:known-ccds chromosome:NCBI36:5:118816103:118905926:1 gene:ENSG00000133835 transcript:ENST00000256216 CCDS4126.1 Length = 736 Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 21/197 (10%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQD---------GANAVAELIEQA 54 +G+ +VTGA +G+G+ D A+ V E I + Sbjct: 6 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 65 Query: 55 GGRAIGVAMDVTNEDAVNAGIDKVAQT----FSSVDILVSNAGIQIVNPIENYAFADWKK 110 GG+A V N D+V G +KV +T F +D++V+NAGI + DW Sbjct: 66 GGKA------VANYDSVEEG-EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDI 118 Query: 111 MQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARV 170 + +H+ G+F T+AA +HM K + G +I S + ++ Y AK GLLGLA Sbjct: 119 IHRVHLRGSFQVTRAAWEHM-KKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANS 177 Query: 171 LAKEGAKHNVRSHVVCP 187 LA EG K N+ + + P Sbjct: 178 LAIEGRKSNIHCNTIAP 194 >ENSP00000372558 pep:novel chromosome:NCBI36:c6_COX:33241150:33242652:1 gene:ENSG00000206216 transcript:ENST00000383080 Length = 231 Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 9/210 (4%) Query: 1 MTSNLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAG----- 55 + + L A+VTGA SGIG+ + ++ A L+ G Sbjct: 5 LQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 64 Query: 56 --GRAIGVAMDVTNEDAVNAGIDKVAQTFS-SVDILVSNAGIQIVNPIENYAFADWKKMQ 112 G DV+ A +++V FS ++VS AGI + + + DW K+ Sbjct: 65 PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 124 Query: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 172 A+++ G FL T+AA + + + G +I + S+ + ++ Y +K G++GL + A Sbjct: 125 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 184 Query: 173 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ 202 +E +H +R + V PGF+ TP+ K +P++ Sbjct: 185 RELGRHGIRCNSVLPGFIATPMTQK-VPQK 213 >ENSP00000326219 pep:known-ccds chromosome:NCBI36:14:23492805:23508326:1 gene:ENSG00000157326 transcript:ENST00000313250 CCDS9605.1 Length = 278 Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 18/258 (6%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMD 64 L K A+VT + GIG I Q + ++ G G Sbjct: 30 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 89 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAF 120 V + + + +DILVSNA VNP I + W K I+V Sbjct: 90 VGKAEDRERLVATAVKLHGGIDILVSNAA---VNPFFGSIMDVTEEVWDKTLDINVKAPA 146 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180 L TKA + M K GG V+ + S+ + SP S Y +K LLGL + LA E A N+ Sbjct: 147 LMTKAVVPEMEKRG-GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNI 205 Query: 181 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFL 240 R + + PG ++T ++ KE + E +++ LG+ ED A V FL Sbjct: 206 RVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRR--LGEP--------EDCAGIVSFL 255 Query: 241 SAFPSAALTGQSFVVSHG 258 + ++ +TG++ VV G Sbjct: 256 CSEDASYITGETVVVGGG 273 >ENSP00000296522 pep:known-ccds chromosome:NCBI36:4:175647958:175680213:-1 gene:ENSG00000164120 transcript:ENST00000296522 CCDS3821.1 Length = 266 Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 21/243 (8%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQD-GANAVAELIEQ-AGGRAIGVA 62 +NGK A+VTGAA GIG+ N + G A L EQ + + + Sbjct: 3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQKTLFIQ 62 Query: 63 MDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLT 122 DV ++ + KV F +DILV+NAG VN +N W+K I++ Sbjct: 63 CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVISG 114 Query: 123 TKAALKHMYKDD--RGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLAR--VLAKEGAKH 178 T L +M K + GG++I M S+ + Y +KHG++G R LA Sbjct: 115 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 174 Query: 179 NVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTV-------DGVFTTVE 231 VR + +CPGFV T +++ E+ I ++ +K ++ + +G+ T +E Sbjct: 175 GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 234 Query: 232 DVA 234 D A Sbjct: 235 DDA 237 >ENSP00000296424 pep:known-ccds chromosome:NCBI36:4:104218232:104240473:-1 gene:ENSG00000164039 transcript:ENST00000296424 CCDS3663.1 Length = 245 Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 12/198 (6%) Query: 63 MDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLT 122 +DVT + ID+ A +D+L + AG + + DW ++V +L Sbjct: 57 LDVTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112 Query: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPL-KSAYVTAKHGLLGLARVLAKEGAKHNVR 181 KA L M + G +I M SV S + + Y T K ++GL + +A + + +R Sbjct: 113 IKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171 Query: 182 SHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLS 241 + VCPG V TP + ++I QA+ G EE + L + G F T E++A ++L+ Sbjct: 172 CNCVCPGTVDTPSLQERI--QAR--GNPEE--ARNDFLKRQKTGRFATAEEIAMLCVYLA 225 Query: 242 AFPSAALTGQSFVVSHGW 259 + SA +TG ++ GW Sbjct: 226 SDESAYVTGNPVIIDGGW 243 >ENSP00000373629 pep:known-ccds chromosome:NCBI36:2:216612243:216654709:-1 gene:ENSG00000115425 transcript:ENST00000388977 CCDS33375.1 Length = 303 Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 33/268 (12%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAE-----LIEQAGGRAI 59 L G+ AIVTG A+GIGK I + + A+ L R I Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75 Query: 60 GVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 119 + ++ NE+ VN + TF ++ LV+N G Q ++P E+ + W + ++ G Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 135 Query: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179 F KA K+ G +V + V + PL A+ G+ L + LA E A Sbjct: 136 FYMCKAVYSSWMKEHGGSIVNII--VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 193 Query: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV-------- 230 +R + V PG + S+ V GQ+ +G F + Sbjct: 194 IRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP 236 Query: 231 EDVAKTVLFLSAFPSAALTGQSFVVSHG 258 E+V+ V FL + ++ +TGQS V G Sbjct: 237 EEVSSVVCFLLSPAASFITGQSVDVDGG 264 >ENSP00000373632 pep:known-ccds chromosome:NCBI36:2:216612243:216654709:-1 gene:ENSG00000115425 transcript:ENST00000388980 CCDS33375.1 Length = 303 Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 33/268 (12%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAE-----LIEQAGGRAI 59 L G+ AIVTG A+GIGK I + + A+ L R I Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75 Query: 60 GVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 119 + ++ NE+ VN + TF ++ LV+N G Q ++P E+ + W + ++ G Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 135 Query: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179 F KA K+ G +V + V + PL A+ G+ L + LA E A Sbjct: 136 FYMCKAVYSSWMKEHGGSIVNII--VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 193 Query: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV-------- 230 +R + V PG + S+ V GQ+ +G F + Sbjct: 194 IRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP 236 Query: 231 EDVAKTVLFLSAFPSAALTGQSFVVSHG 258 E+V+ V FL + ++ +TGQS V G Sbjct: 237 EEVSSVVCFLLSPAASFITGQSVDVDGG 264 >ENSP00000320352 pep:known-ccds chromosome:NCBI36:17:20970850:21035428:1 gene:ENSG00000109016 transcript:ENST00000346603 CCDS11215.1 Length = 325 Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 13/253 (5%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGG-------- 56 L ++TGA SG+GKE N A+ ELI + Sbjct: 50 LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN---GGALEELIRELTASHATKVQT 106 Query: 57 -RAIGVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 115 + V D+T+ A+ A ++ Q F VDILV+NAGI I + K++ + Sbjct: 107 HKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETN 166 Query: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175 G TKA L M K R G ++ + S+ + P +SAY +KH L E Sbjct: 167 YFGPVALTKALLPSMIKR-RQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEM 225 Query: 176 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAK 235 ++ + V+ PG++ T L I G+ + + + V V K Sbjct: 226 EQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQGRSPVEVAQDVLAAVGKKKK 285 Query: 236 TVLFLSAFPSAAL 248 V+ PS A+ Sbjct: 286 DVILADLLPSLAV 298 >ENSP00000351035 pep:known-ccds chromosome:NCBI36:4:88476790:88531369:-1 gene:ENSG00000198189 transcript:ENST00000358290 CCDS3619.1 Length = 300 Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 6/220 (2%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAM 63 ++ G+ ++TGA GIG+ N+ G A + G + + Sbjct: 33 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 92 Query: 64 DVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 123 D +N + + + KV V ILV+NAG+ + + +K ++V F TT Sbjct: 93 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 152 Query: 124 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN---V 180 KA L M K++ G +V + S H + P AY ++K +G + L E A V Sbjct: 153 KAFLPAMTKNNHGHIVT-VASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 211 Query: 181 RSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG 220 ++ +CP FV T + P + + EEVV ++M G Sbjct: 212 KTTCLCPNFVNTGFIKN--PSTSLGPTLEPEEVVNRLMHG 249 >ENSP00000333300 pep:known-ccds chromosome:NCBI36:4:88443965:88463062:-1 gene:ENSG00000170509 transcript:ENST00000328546 CCDS3618.1 Length = 300 Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 20/253 (7%) Query: 7 GKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMDVT 66 G+ ++TGA GIG++ N+ G A + G A +D + Sbjct: 36 GEIVLITGAGHGIGRQTTYEFAKRQSILVLWDINKRGVEETAAECRKLGVTAHAYVVDCS 95 Query: 67 NEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVD--GAFLTTK 124 N + + +++V + V I+V+NAG V P + + D + + V+ G F TK Sbjct: 96 NREEIYRSLNQVKKEVGDVTIVVNNAG--TVYPADLLSTKDEEITKTFEVNILGHFWITK 153 Query: 125 AALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE---GAKHNVR 181 A L M + + G +V + SV HE P Y ++K +G R L E K ++ Sbjct: 154 ALLPSMMERNHGHIVT-VASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIK 212 Query: 182 SHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLS 241 + +CP FV T P + +EVV+ + +DG+ T K ++F+ Sbjct: 213 TSCLCPVFVNTGFTKN--PSTRLWPVLETDEVVRSL-----IDGILTN-----KKMIFVP 260 Query: 242 AFPSAALTGQSFV 254 ++ + L Q F+ Sbjct: 261 SYINIFLRLQKFL 273 >ENSP00000261494 pep:known chromosome:NCBI36:17:20970850:21035428:1 gene:ENSG00000109016 transcript:ENST00000261494 Length = 285 Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 13/223 (5%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGG-------- 56 L ++TGA SG+GKE N A+ ELI + Sbjct: 50 LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN---GGALEELIRELTASHATKVQT 106 Query: 57 -RAIGVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 115 + V D+T+ A+ A ++ Q F VDILV+NAGI I + K++ + Sbjct: 107 HKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETN 166 Query: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175 G TKA L M K R G ++ + S+ + P +SAY +KH L E Sbjct: 167 YFGPVALTKALLPSMIK-RRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEM 225 Query: 176 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVM 218 ++ + V+ PG++ T L I G+ + ++ + Sbjct: 226 EQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQEAL 268 >ENSP00000265322 pep:known chromosome:NCBI36:2:216611357:216654709:-1 gene:ENSG00000115425 transcript:ENST00000265322 Length = 302 Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 34/268 (12%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAE-----LIEQAGGRAI 59 L G+ AIVTG A+GIGK I + + A+ L R I Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGTNVVIASRKLERLKSAADELQANLPPTKQARVI 75 Query: 60 GVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 119 + ++ NE+ VN + TF ++ LV+N G Q ++P E+ + W + ++ G Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGT 135 Query: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179 F KA + + + GG ++ + V + PL A+ G+ L + LA E A Sbjct: 136 FYMCKAG--NSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG 192 Query: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQT-VDGVFTTV-------- 230 +R + V PG + S+ V GQ+ +G F + Sbjct: 193 IRINCVAPGVI-----------------YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP 235 Query: 231 EDVAKTVLFLSAFPSAALTGQSFVVSHG 258 E+V+ V FL + ++ +TGQS V G Sbjct: 236 EEVSSVVCFLLSPAASFITGQSVDVDGG 263 >ENSP00000220764 pep:known-ccds chromosome:NCBI36:8:91082756:91133403:1 gene:ENSG00000104325 transcript:ENST00000220764 CCDS6250.1 Length = 335 Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 42 DGANAVAELIE-QAGGRAIGVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPI 100 D A AE I Q G + + DV + D V + ++ + +I+++NA ++P Sbjct: 94 DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPT 153 Query: 101 ENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA 160 E + WK + I ++G T K + K +G + + ++++ S +A Sbjct: 154 ERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA 213 Query: 161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG 220 K G+ +++ LA E K+ +R +V+ PG P+ K + G E+E M+G Sbjct: 214 KAGVEAMSKSLAAEWGKYGMRFNVIQPG----PIKTKGAFSRLDPTGTFEKE-----MIG 264 Query: 221 QTVDGVFTTVEDVAKTVLFLSA 242 + G TVE++A FL + Sbjct: 265 RIPCGRLGTVEELANLAAFLCS 286 >ENSP00000327975 pep:known chromosome:NCBI36:17:9615536:9635371:-1 gene:ENSG00000184544 transcript:ENST00000330255 Length = 326 Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 16/262 (6%) Query: 3 SNLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXN-------QDGANAVAELIEQAG 55 S + K ++T A SG+GKE N D +VA+ +Q Sbjct: 48 SAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKNWERLENLYDALISVADPSKQTF 107 Query: 56 GRAIGVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIH 115 + V +D+++ V +V + VDIL++NA +++ P + KK+ + Sbjct: 108 TPKL-VLLDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDAN 166 Query: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175 G TKA L +M R G ++ + ++ P ++ Y +KH LG L E Sbjct: 167 YFGPITLTKALLPNMI-SRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEV 225 Query: 176 AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG----QTVDGVFTTVE 231 +++V V P F+R+ V PEQ + +K+ G + + V TV Sbjct: 226 EEYDVVISTVSPTFIRSYHV---YPEQGNWEASIWKFFFRKLTYGVHPVEVAEEVMRTVR 282 Query: 232 DVAKTVLFLSAFPSAALTGQSF 253 + V + P AA+ ++F Sbjct: 283 RKKQEVFMANPIPKAAVYVRTF 304 >ENSP00000219481 pep:known-ccds chromosome:NCBI36:16:391827:402463:1 gene:ENSG00000103202 transcript:ENST00000219481 CCDS10409.1 Length = 292 Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 12/258 (4%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGA-NAVAELIEQAGGRAIGVAM 63 L K A +TG SGIG I + A +L G R + ++M Sbjct: 26 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 85 Query: 64 DVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 123 DV AV A +D+ + F +DIL++ A + P +F +K + I G F + Sbjct: 86 DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 145 Query: 124 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 183 + + ++ D GGV++ + + + L+ +AK + + R LA E N+R + Sbjct: 146 RVLYEKFFR-DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 204 Query: 184 VVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAF 243 + PG P+ E + LG + + KV ++A +VL+L++ Sbjct: 205 SLAPG----PISGT---EGLRRLGGPQASLSTKVTASPLQR--LGNKTEIAHSVLYLASP 255 Query: 244 PSAALTGQSFVVSHG-WF 260 ++ +TG V G W Sbjct: 256 LASYVTGAVLVADGGAWL 273 >ENSP00000296521 pep:known chromosome:NCBI36:4:175647958:175680213:-1 gene:ENSG00000164120 transcript:ENST00000296521 Length = 178 Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 12/170 (7%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXN-QDGANAVAELIEQ-AGGRAIGV 61 ++NGK A+VTGAA GIG+ N + G A L EQ + + + Sbjct: 2 HVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQKTLFI 61 Query: 62 AMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFL 121 DV ++ + KV F +DILV+NAG VN +N W+K I++ Sbjct: 62 QCDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVIS 113 Query: 122 TTKAALKHMYKDD--RGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLAR 169 T L +M K + GG++I M S+ + Y +KHG++G R Sbjct: 114 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 163 >ENSP00000250383 pep:known-ccds chromosome:NCBI36:14:23177081:23184686:1 gene:ENSG00000100867 transcript:ENST00000250383 CCDS9604.1 Length = 280 Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 9/192 (4%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMD 64 L + A+VTG+ SGIG I Q + ++ G G+ Sbjct: 34 LANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCH 93 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFAD----WKKMQAIHVDGAF 120 V + + K + VD LV +AG VNP+ W K+ +++V Sbjct: 94 VGKAEDREQLVAKALEHCGGVDFLVCSAG---VNPLVGSTLGTSEQIWDKILSVNVKSPA 150 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180 L L +M ++R G VI + S+ ++ Y +K LLGL R LA E A ++ Sbjct: 151 LLLSQLLPYM--ENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDI 208 Query: 181 RSHVVCPGFVRT 192 R + V PG ++T Sbjct: 209 RVNCVVPGIIKT 220 >ENSP00000344674 pep:known chromosome:NCBI36:14:23177081:23184686:1 gene:ENSG00000100867 transcript:ENST00000344777 Length = 303 Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 9/192 (4%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMD 64 L + A+VTG+ SGIG I Q + ++ G G+ Sbjct: 34 LANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCH 93 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFAD----WKKMQAIHVDGAF 120 V + + K + VD LV +AG VNP+ W K+ +++V Sbjct: 94 VGKAEDREQLVAKALEHCGGVDFLVCSAG---VNPLVGSTLGTSEQIWDKILSVNVKSPA 150 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180 L L +M ++R G VI + S+ ++ Y +K LLGL R LA E A ++ Sbjct: 151 LLLSQLLPYM--ENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDI 208 Query: 181 RSHVVCPGFVRT 192 R + V PG ++T Sbjct: 209 RVNCVVPGIIKT 220 >ENSP00000168216 pep:known-ccds chromosome:NCBI36:X:53474931:53478045:-1 gene:ENSG00000072506 transcript:ENST00000168216 CCDS14354.1 Length = 261 Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 15/210 (7%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAM 63 ++ G A++TG ASG+G G A A+ + G + Sbjct: 7 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK---KLGNNCVFAPA 63 Query: 64 DVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIEN------YAFADWKKMQAIHVD 117 DVT+E V + F VD+ V+ AGI + + N + D++++ +++ Sbjct: 64 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123 Query: 118 GAFLTTKAALKHMYKD--DRGG---VVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 172 G F + M ++ D+GG V+I SV + E ++AY +K G++G+ +A Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183 Query: 173 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ 202 ++ A +R + PG TPL+ +PE+ Sbjct: 184 RDLAPIGIRVMTIAPGLFGTPLL-TSLPEK 212 >ENSP00000288111 pep:known-ccds chromosome:NCBI36:14:23829649:23838815:-1 gene:ENSG00000157379 transcript:ENST00000288111 CCDS9623.1 Length = 313 Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 28/265 (10%) Query: 1 MTSNLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIG 60 M + +NG+ +VTGA+ GIG+ I + D VA+ + GG+ + Sbjct: 1 MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP 60 Query: 61 VAMDVTNEDAVNAGIDKV-AQTFSSVDILVSN--AGIQIVNPIENYAFAD-----WKKMQ 112 V D + E V + ++V + +D+LV+N AG+Q + N AF + W + Sbjct: 61 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 120 Query: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYM--GSVHSHEASPLKSAYVTAKHGLLGLARV 170 + + G + + + M +G +V+ GS+ P Y K LA Sbjct: 121 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP----YGVGKAACDKLAAD 176 Query: 171 LAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTV 230 A E +H V + PG V+T L+ + +++EEV++ +L Q F++ Sbjct: 177 CAHELRRHGVSCVSLWPGIVQTELLKEH---------MAKEEVLQDPVLKQ-FKSAFSSA 226 Query: 231 EDV---AKTVLFLSAFPS-AALTGQ 251 E K V+ L+ P+ +L+G+ Sbjct: 227 ETTELSGKCVVALATDPNILSLSGK 251 >ENSP00000171214 pep:known-ccds chromosome:NCBI36:19:9984925:9993954:1 gene:ENSG00000080511 transcript:ENST00000171214 CCDS12223.1 Length = 311 Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 8/189 (4%) Query: 8 KAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMDVTN 67 + +++G +SGIG E+ E +E A G A+G + V Sbjct: 6 RTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGK-KETLEAAAGEALGQTLTVAQ 64 Query: 68 EDAVNAGIDKVAQTFSS----VDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTT 123 D + + VAQ S VD+LV+NAG+ +V P+E + A + + + GA Sbjct: 65 LDVCSD--ESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLV 122 Query: 124 KAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 183 KA L M K R G ++ + SV + Y +K L G LA + + N+ Sbjct: 123 KAVLPGM-KRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFIS 181 Query: 184 VVCPGFVRT 192 +V PG V T Sbjct: 182 LVEPGPVVT 190 >ENSP00000353759 pep:known chromosome:NCBI36:14:59681255:59701900:-1 gene:ENSG00000100612 transcript:ENST00000360557 Length = 375 Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%) Query: 12 VTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIG----------- 60 VTGA+SGIG+E+ A V EL E+ R + Sbjct: 55 VTGASSGIGEELAYQLSKLGVSLVL------SARRVHEL-ERVKRRCLENGNLKEKDILV 107 Query: 61 VAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAF 120 + +D+T+ + A V Q F +DILV+N G+ + + + ++K+ ++ G Sbjct: 108 LPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTV 167 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH-N 179 TK L HM + +G +V + S+ + PL Y +KH L G L E A + Sbjct: 168 SLTKCVLPHMIERKQGKIVT-VNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPG 226 Query: 180 VRSHVVCPGFVRTPLVDKQIP-EQAKELG 207 + +CPG V++ +V+ + E K +G Sbjct: 227 IIVSNICPGPVQSNIVENSLAGEVTKTIG 255 >ENSP00000216500 pep:known-ccds chromosome:NCBI36:14:59681255:59701900:-1 gene:ENSG00000100612 transcript:ENST00000216500 CCDS9743.1 Length = 339 Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%) Query: 12 VTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIG----------- 60 VTGA+SGIG+E+ A V EL E+ R + Sbjct: 55 VTGASSGIGEELAYQLSKLGVSLVL------SARRVHEL-ERVKRRCLENGNLKEKDILV 107 Query: 61 VAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAF 120 + +D+T+ + A V Q F +DILV+N G+ + + + ++K+ ++ G Sbjct: 108 LPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTV 167 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKH-N 179 TK L HM + +G +V + S+ + PL Y +KH L G L E A + Sbjct: 168 SLTKCVLPHMIERKQGKIVT-VNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPG 226 Query: 180 VRSHVVCPGFVRTPLVDKQIP-EQAKELG 207 + +CPG V++ +V+ + E K +G Sbjct: 227 IIVSNICPGPVQSNIVENSLAGEVTKTIG 255 >ENSP00000334801 pep:known-ccds chromosome:NCBI36:14:23527959:23545444:1 gene:ENSG00000187630 transcript:ENST00000335125 CCDS9606.1 Length = 230 Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 77/202 (38%), Gaps = 19/202 (9%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMD 64 L K A+VT + GIG I Q + ++ G G Sbjct: 28 LTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCH 87 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAF 120 V + + + +DILVSNA VNP + + W K I+V Sbjct: 88 VGKAEDRERLVAMAVKLHGGIDILVSNAA---VNPFFGSLMDVTEEVWDKTLDINVKAPA 144 Query: 121 LTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180 L TKA + M K GG V+ + S+ + SP S Y +K LLGL LA E A N+ Sbjct: 145 LMTKAVVPEMEKRG-GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNI 203 Query: 181 RSHVV-----------CPGFVR 191 R + + C G+ R Sbjct: 204 RVNCLHLDLSRLASAGCSGWTR 225 >ENSP00000263278 pep:known-ccds chromosome:NCBI36:19:54008091:54031746:-1 gene:ENSG00000087076 transcript:ENST00000263278 CCDS12736.1 Length = 270 Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 25/213 (11%) Query: 43 GANAVAELIEQAGGRAIG--------VAMDVTNEDAVNAGIDKVAQTFSSVDILVSNAG- 93 GA V +++GGRA+ + DVT ED V + + + F +D +V+NAG Sbjct: 33 GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH 92 Query: 94 -IQIVNPIENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVV---IYMGSVHSHE 149 P E A ++++ +++ G + TK AL ++ K +G V+ +G++ + Sbjct: 93 HPPPQRPEETSA-QGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQ 150 Query: 150 ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGIS 209 A P YV K + + + LA + + + VR + + PG + TPL E+ L Sbjct: 151 AVP----YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW-----EELAALMPD 201 Query: 210 EEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSA 242 +++ ML Q + G +V +FL++ Sbjct: 202 PRATIREGMLAQPL-GRMGQPAEVGAAAVFLAS 233 >ENSP00000251312 pep:known chromosome:NCBI36:17:32022442:32031324:1 gene:ENSG00000108272 transcript:ENST00000251312 Length = 260 Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 23/247 (9%) Query: 8 KAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAG--GRAIGVAMDV 65 + A+VTGA+ GIG + +A + AG G I D+ Sbjct: 12 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 71 Query: 66 TNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTKA 125 +NE+ + + + S VDI ++NAG+ + + + + + WK M ++V + T+ Sbjct: 72 SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 131 Query: 126 ALKHMYK---DDRGGVVIYMGSVHSHEASPLKSA--YVTAKHGLLGLARVLAKE--GAKH 178 A + M + DD G +I + S+ H PL Y K+ + L L +E A+ Sbjct: 132 AYQSMKERNVDD--GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 189 Query: 179 NVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVL 238 ++R+ + PG V T K + ++ E + E +K + EDVA+ V+ Sbjct: 190 HIRATCISPGVVETQFAFK-LHDKDPEKAAATYEQMKCL-----------KPEDVAEAVI 237 Query: 239 FLSAFPS 245 ++ + P+ Sbjct: 238 YVLSTPA 244 >ENSP00000307607 pep:known-ccds chromosome:NCBI36:8:57375122:57395795:-1 gene:ENSG00000170786 transcript:ENST00000303749 CCDS6167.1 Length = 309 Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 6/245 (2%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGG-RAIGVA 62 N+ G+ ++TGA SG+G+ + N++G ++ +AG R Sbjct: 37 NVAGEIVLITGAGSGLGRLLALQFARLGSVLVLWDINKEGNEETCKMAREAGATRVHAYT 96 Query: 63 MDVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLT 122 D + ++ V D+V + V IL++NAGI + +K ++ T Sbjct: 97 CDCSQKEGVYRVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSFDVNFKAHLWT 156 Query: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG---AKHN 179 KA L M +D G +V S + L + Y +K G A + E + Sbjct: 157 YKAFLPAMIANDHGHLVCISSSAGLSGVNGL-ADYCASKFAAFGFAESVFVETFVQKQKG 215 Query: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEV-VKKVMLGQTVDGVFTTVEDVAKTVL 238 +++ +VCP F++T + + L I E + V+K++ + ++ + + ++ Sbjct: 216 IKTTIVCPFFIKTGMFEGCTTGCPSLLPILEPKYAVEKIVEAILQEKMYLYMPKLLYFMM 275 Query: 239 FLSAF 243 FL +F Sbjct: 276 FLKSF 280 >ENSP00000262542 pep:known chromosome:NCBI36:9:114196641:114274505:1 gene:ENSG00000119471 transcript:ENST00000262542 Length = 417 Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 33/149 (22%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAV---------------- 47 L G +TGA+ GIGK I +DGAN V Sbjct: 6 RLAGCTVFITGASRGIGKAIALKAA------------KDGANIVIAAKTAQPHPKLLGTI 53 Query: 48 ---AELIEQAGGRAIGVAMDVTNEDAVNAGIDKVAQTFSSVDILVSNA-GIQIVNPIENY 103 AE IE GG+A+ +DV +E ++A ++K + F +DILV+NA I + N ++ Sbjct: 54 YTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTP 113 Query: 104 AFADWKKMQAIHVDGAFLTTKAALKHMYK 132 M ++ G +L +KA + ++ K Sbjct: 114 T-KRLDLMMNVNTRGTYLASKACIPYLKK 141 >ENSP00000303356 pep:known-ccds chromosome:NCBI36:17:77587046:77588862:-1 gene:ENSG00000169738 transcript:ENST00000306869 CCDS11799.1 Length = 244 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 18/256 (7%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAMD 64 L G+ +VTGA GIG+ Q ++ L+ + G V +D Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS---LVRECPGIE-PVCVD 60 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTK 124 + + +A + V VD+LV+NA + ++ P + + +++ ++ Sbjct: 61 LGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116 Query: 125 AALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHV 184 + + G ++ + S S A S Y + K L L +V+A E H +R + Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176 Query: 185 VCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVLFLSAFP 244 V P V T + + K K ML + G F VE V +LFL + Sbjct: 177 VNPTVVMTSMGQATWSDPHK----------AKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 Query: 245 SAALTGQSFVVSHGWF 260 S TG + V G++ Sbjct: 227 SGMTTGSTLPVEGGFW 242 >ENSP00000312939 pep:known-ccds chromosome:NCBI36:18:59148813:59185438:-1 gene:ENSG00000119537 transcript:ENST00000326575 CCDS11982.1 Length = 332 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 6/194 (3%) Query: 5 LNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGR----AIG 60 L G +VTG +SGIGK I N+D + IE + Sbjct: 30 LPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEMHSINDKQVVLC 89 Query: 61 VAMDVTNE-DAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGA 119 +++DV+ + + V I + + VD+LV+ AG+ + E+ + ++++ +I+ G+ Sbjct: 90 ISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGMAVSGKFEDLEVSTFERLMSINYLGS 149 Query: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179 ++A + M K+ R G ++++ S +AY +K + GLA L E +N Sbjct: 150 VYPSRAVITTM-KERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYN 208 Query: 180 VRSHVVCPGFVRTP 193 V V P TP Sbjct: 209 VYITVAYPPDTDTP 222 >ENSP00000372203 pep:known chromosome:NCBI36:14:23527959:23545444:1 gene:ENSG00000187630 transcript:ENST00000382755 Length = 158 Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 85 VDILVSNAGIQIVNP----IENYAFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVI 140 +DILVSNA VNP + + W K I+V L TKA + M K GG V+ Sbjct: 9 IDILVSNAA---VNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG-GGSVV 64 Query: 141 YMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVV 185 + S+ + SP S Y +K LLGL LA E A N+R + + Sbjct: 65 IVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNIRVNCL 109 >ENSP00000364453 pep:known-ccds chromosome:NCBI36:X:53474931:53478028:-1 gene:ENSG00000072506 transcript:ENST00000375304 CCDS35300.1 Length = 252 Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 24/210 (11%) Query: 4 NLNGKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAM 63 ++ G A++TG ASG+G G A A+ + G + Sbjct: 7 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK---KLGNNCVFAPA 63 Query: 64 DVTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIEN------YAFADWKKMQAIHVD 117 DVT+E V + F VD+ V+ AGI + + N + D++++ +++ Sbjct: 64 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123 Query: 118 GAFLTTKAALKHMYKD--DRG---GVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLA 172 G F + M ++ D+G GV+I SV + E ++AY +K G++G+ +A Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183 Query: 173 KEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ 202 ++ A G TPL+ +PE+ Sbjct: 184 RDLAPI---------GLFGTPLL-TSLPEK 203 >ENSP00000364412 pep:known-ccds chromosome:NCBI36:9:98037409:98104255:-1 gene:ENSG00000130948 transcript:ENST00000375263 CCDS6716.1 Length = 310 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 15/253 (5%) Query: 7 GKAAIVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIGVAM-DV 65 G+ A++TGA GIGK + A+A IE+ GR++ + D Sbjct: 48 GQWAVITGAGDGIGKAYSFELAKRGLNVVLISRTLEKLEAIATEIERTTGRSVKIIQADF 107 Query: 66 TNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAI---HVDGAFLT 122 T +D +K+A + ILV+N G+ + N + ++ ++Q++ ++ Sbjct: 108 TKDDIYEHIKEKLAGL--EIGILVNNVGM-LPNLLPSHFLNAPDEIQSLIHCNITSVVKM 164 Query: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182 T+ LKHM + + G+++ + S + PL S Y +K + ++ L +E V Sbjct: 165 TQLILKHM-ESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVII 223 Query: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGQTVDGVFTTVEDVAKTVL--FL 240 V+ P V T + + + +E VK+ + T+ G T +A +L FL Sbjct: 224 QVLTPYAVSTAMTKYL---NTNVITKTADEFVKESLNYVTIGG--ETCGCLAHEILAGFL 278 Query: 241 SAFPSAALTGQSF 253 S P+ A +F Sbjct: 279 SLIPAWAFYSGAF 291 >ENSP00000225929 pep:known-ccds chromosome:NCBI36:17:37954758:37960750:1 gene:ENSG00000108786 transcript:ENST00000225929 CCDS11428.1 Length = 328 Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 13/201 (6%) Query: 11 IVTGAASGIGKEIXXXXXXXXXXXXXXXXNQDGANAVAELIEQAGGRAIG------VAMD 64 ++TG +SGIG + L E A A + +D Sbjct: 7 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 66 Query: 65 VTNEDAVNAGIDKVAQTFSSVDILVSNAGIQIVNPIENYAFADWKKMQAIHVDGAFLTTK 124 V + +V A ++V + VD+LV NAG+ ++ P+E + ++V G + Sbjct: 67 VRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 124 Query: 125 AALKHMYKDDRG-GVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH 183 A L M + RG G V+ GSV P Y +K L GL LA V Sbjct: 125 AFLPDMKR--RGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 182 Query: 184 VVCPGFVRTPLVDKQI--PEQ 202 ++ G V T ++K + PE+ Sbjct: 183 LIECGPVHTAFMEKVLGSPEE 203 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0019[412022] (323 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000318772 pep:known-ccds chromosome:NCBI36:1:6008967:60831... 300 2e-81 ENSP00000367332 pep:known-ccds chromosome:NCBI36:1:5975348:60812... 300 2e-81 ENSP00000164247 pep:known-ccds chromosome:NCBI36:1:6016930:60838... 299 3e-81 ENSP00000340824 pep:known-ccds chromosome:NCBI36:1:6008967:60831... 299 3e-81 ENSP00000367337 pep:known-ccds chromosome:NCBI36:1:5975010:60838... 299 3e-81 ENSP00000374284 pep:known-ccds chromosome:NCBI36:3:157492391:157... 295 5e-80 ENSP00000374283 pep:known-ccds chromosome:NCBI36:3:157492391:157... 295 5e-80 ENSP00000302719 pep:known-ccds chromosome:NCBI36:17:7766752:7773... 294 7e-80 ENSP00000369659 pep:known-ccds chromosome:NCBI36:17:7765902:7773... 294 7e-80 ENSP00000374286 pep:known-ccds chromosome:NCBI36:3:157343662:157... 293 2e-79 ENSP00000374285 pep:known-ccds chromosome:NCBI36:3:157343662:157... 293 2e-79 ENSP00000367323 pep:known chromosome:NCBI36:1:6028568:6083826:1 ... 293 2e-79 ENSP00000374287 pep:known-ccds chromosome:NCBI36:3:157321095:157... 292 4e-79 ENSP00000374288 pep:known-ccds chromosome:NCBI36:3:157321095:157... 292 4e-79 ENSP00000273475 pep:novel chromosome:NCBI36:3:157343662:15773723... 288 4e-78 ENSP00000372429 pep:novel chromosome:NCBI36:3:157321095:15773723... 287 1e-77 ENSP00000305858 pep:novel chromosome:NCBI36:3:157491520:15773923... 275 5e-74 ENSP00000317378 pep:known chromosome:NCBI36:3:157491520:15773923... 234 1e-61 ENSP00000373538 pep:known chromosome:NCBI36:1:19466190:19473119:... 86 8e-17 ENSP00000355377 pep:known-ccds chromosome:NCBI36:1:19481639:1948... 84 2e-16 ENSP00000339084 pep:novel chromosome:NCBI36:1:19503046:19511203:... 84 2e-16 ENSP00000235835 pep:known-ccds chromosome:NCBI36:1:19503051:1951... 83 4e-16 ENSP00000367327 pep:known chromosome:NCBI36:1:6008967:6082665:1 ... 72 6e-13 ENSP00000367351 pep:known chromosome:NCBI36:1:5974113:6082822:1 ... 72 6e-13 >ENSP00000318772 pep:known-ccds chromosome:NCBI36:1:6008967:6083110:1 gene:ENSG00000069424 transcript:ENST00000352527 CCDS56.1 Length = 353 Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 214/323 (66%), Gaps = 5/323 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E Sbjct: 23 MIYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAE 82 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 ++G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+ Sbjct: 83 VVLGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDV 140 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPDPNTP+EETV AM+ +I +G A+YWGTS WS+ EI AY +A + +L P EQ Sbjct: 141 VFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQ 200 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y++F R++VE + L+ G+G TWSPLA G+++GKY G+P SRA + GY WL+ Sbjct: 201 AEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLK 260 Query: 241 AQLTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ R L E IA LGCT+ QLA+AW L+N VS+V+ GAS +Q++EN+ Sbjct: 261 DKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENI 320 Query: 298 RSLDVATQITPDMKQQIEQIVGD 320 ++ V +++ + +I+ I+G+ Sbjct: 321 GAIQVLPKLSSSIIHEIDSILGN 343 >ENSP00000367332 pep:known-ccds chromosome:NCBI36:1:5975348:6081221:1 gene:ENSG00000069424 transcript:ENST00000378092 CCDS56.1 Length = 353 Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 214/323 (66%), Gaps = 5/323 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E Sbjct: 23 MIYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAE 82 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 ++G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+ Sbjct: 83 VVLGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDV 140 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPDPNTP+EETV AM+ +I +G A+YWGTS WS+ EI AY +A + +L P EQ Sbjct: 141 VFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQ 200 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y++F R++VE + L+ G+G TWSPLA G+++GKY G+P SRA + GY WL+ Sbjct: 201 AEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLK 260 Query: 241 AQLTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ R L E IA LGCT+ QLA+AW L+N VS+V+ GAS +Q++EN+ Sbjct: 261 DKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENI 320 Query: 298 RSLDVATQITPDMKQQIEQIVGD 320 ++ V +++ + +I+ I+G+ Sbjct: 321 GAIQVLPKLSSSIIHEIDSILGN 343 >ENSP00000164247 pep:known-ccds chromosome:NCBI36:1:6016930:6083826:1 gene:ENSG00000069424 transcript:ENST00000164247 CCDS55.1 Length = 367 Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 213/321 (66%), Gaps = 5/321 (1%) Query: 3 YRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEI 62 YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E + Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98 Query: 63 MGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDLVF 122 +G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+VF Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDVVF 156 Query: 123 CHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQPQ 182 +RPDPNTP+EETV AM+ +I +G A+YWGTS WS+ EI AY +A + +L P EQ + Sbjct: 157 ANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAE 216 Query: 183 YNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLRAQ 242 Y++F R++VE + L+ G+G TWSPLA G+++GKY G+P SRA + GY WL+ + Sbjct: 217 YHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDK 276 Query: 243 LTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENMRS 299 + R L E IA LGCT+ QLA+AW L+N VS+V+ GAS +Q++EN+ + Sbjct: 277 ILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGA 336 Query: 300 LDVATQITPDMKQQIEQIVGD 320 + V +++ + +I+ I+G+ Sbjct: 337 IQVLPKLSSSIIHEIDSILGN 357 >ENSP00000340824 pep:known-ccds chromosome:NCBI36:1:6008967:6083110:1 gene:ENSG00000069424 transcript:ENST00000341524 CCDS55.1 Length = 367 Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 213/321 (66%), Gaps = 5/321 (1%) Query: 3 YRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEI 62 YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E + Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98 Query: 63 MGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDLVF 122 +G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+VF Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDVVF 156 Query: 123 CHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQPQ 182 +RPDPNTP+EETV AM+ +I +G A+YWGTS WS+ EI AY +A + +L P EQ + Sbjct: 157 ANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAE 216 Query: 183 YNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLRAQ 242 Y++F R++VE + L+ G+G TWSPLA G+++GKY G+P SRA + GY WL+ + Sbjct: 217 YHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDK 276 Query: 243 LTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENMRS 299 + R L E IA LGCT+ QLA+AW L+N VS+V+ GAS +Q++EN+ + Sbjct: 277 ILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGA 336 Query: 300 LDVATQITPDMKQQIEQIVGD 320 + V +++ + +I+ I+G+ Sbjct: 337 IQVLPKLSSSIIHEIDSILGN 357 >ENSP00000367337 pep:known-ccds chromosome:NCBI36:1:5975010:6083840:1 gene:ENSG00000069424 transcript:ENST00000378097 CCDS55.1 Length = 367 Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 213/321 (66%), Gaps = 5/321 (1%) Query: 3 YRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEI 62 YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E + Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98 Query: 63 MGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDLVF 122 +G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+VF Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDVVF 156 Query: 123 CHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQPQ 182 +RPDPNTP+EETV AM+ +I +G A+YWGTS WS+ EI AY +A + +L P EQ + Sbjct: 157 ANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAE 216 Query: 183 YNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLRAQ 242 Y++F R++VE + L+ G+G TWSPLA G+++GKY G+P SRA + GY WL+ + Sbjct: 217 YHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDK 276 Query: 243 LTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENMRS 299 + R L E IA LGCT+ QLA+AW L+N VS+V+ GAS +Q++EN+ + Sbjct: 277 ILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGA 336 Query: 300 LDVATQITPDMKQQIEQIVGD 320 + V +++ + +I+ I+G+ Sbjct: 337 IQVLPKLSSSIIHEIDSILGN 357 >ENSP00000374284 pep:known-ccds chromosome:NCBI36:3:157492391:157737230:1 gene:ENSG00000169282 transcript:ENST00000389633 CCDS33882.1 Length = 401 Score = 295 bits (754), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 130 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 131 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 188 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 189 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 248 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 249 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 308 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 309 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 368 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 369 GAIQVLPKMTSHVVNEIDNIL 389 >ENSP00000374283 pep:known-ccds chromosome:NCBI36:3:157492391:157737230:1 gene:ENSG00000169282 transcript:ENST00000389632 CCDS33882.1 Length = 401 Score = 295 bits (754), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 130 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 131 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 188 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 189 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 248 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 249 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 308 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 309 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 368 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 369 GAIQVLPKMTSHVVNEIDNIL 389 >ENSP00000302719 pep:known-ccds chromosome:NCBI36:17:7766752:7773478:-1 gene:ENSG00000170049 transcript:ENST00000303790 CCDS11124.1 Length = 404 Score = 294 bits (753), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 151/323 (46%), Positives = 208/323 (64%), Gaps = 5/323 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G+Q+ GVN FD AEVYA GK+E Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAE 137 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 +G+ LKS GW R SYV++TK FWG +A + L+RK+++ + SL+RLQL YVD+ Sbjct: 138 RTLGNILKSKGWRRSSYVITTKIFWG-GQAETE-RGLSRKHIIEGLRGSLERLQLGYVDI 195 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +R DPN P+EE V AM+ +I +G ALYWGTS W A EI AY +A + +L P EQ Sbjct: 196 VFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQ 255 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWL- 239 +++LF R++VE + LY G+G TW PLA GL+T KY VP RA I GY WL Sbjct: 256 AEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRASIKGYQWLK 315 Query: 240 -RAQLTDPAKNRV-VEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 + Q D K + V L +A+ LGCTV QLA+AW L++ VS+V+ G S EQ+IE++ Sbjct: 316 DKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHL 375 Query: 298 RSLDVATQITPDMKQQIEQIVGD 320 +L V +Q+TP +I+ ++G+ Sbjct: 376 GALQVLSQLTPQTVMEIDGLLGN 398 >ENSP00000369659 pep:known-ccds chromosome:NCBI36:17:7765902:7773478:-1 gene:ENSG00000170049 transcript:ENST00000380304 CCDS11124.1 Length = 404 Score = 294 bits (753), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 151/323 (46%), Positives = 208/323 (64%), Gaps = 5/323 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G+Q+ GVN FD AEVYA GK+E Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAE 137 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 +G+ LKS GW R SYV++TK FWG +A + L+RK+++ + SL+RLQL YVD+ Sbjct: 138 RTLGNILKSKGWRRSSYVITTKIFWG-GQAETE-RGLSRKHIIEGLRGSLERLQLGYVDI 195 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +R DPN P+EE V AM+ +I +G ALYWGTS W A EI AY +A + +L P EQ Sbjct: 196 VFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQ 255 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWL- 239 +++LF R++VE + LY G+G TW PLA GL+T KY VP RA I GY WL Sbjct: 256 AEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSKYDGRVPDTCRASIKGYQWLK 315 Query: 240 -RAQLTDPAKNRV-VEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 + Q D K + V L +A+ LGCTV QLA+AW L++ VS+V+ G S EQ+IE++ Sbjct: 316 DKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLRSEGVSSVLLGVSSAEQLIEHL 375 Query: 298 RSLDVATQITPDMKQQIEQIVGD 320 +L V +Q+TP +I+ ++G+ Sbjct: 376 GALQVLSQLTPQTVMEIDGLLGN 398 >ENSP00000374286 pep:known-ccds chromosome:NCBI36:3:157343662:157737230:1 gene:ENSG00000169282 transcript:ENST00000389635 CCDS3175.1 Length = 408 Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 137 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 138 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 195 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 196 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 255 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 256 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 315 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 316 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 375 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 376 GAIQVLPKMTSHVVNEIDNIL 396 >ENSP00000374285 pep:known-ccds chromosome:NCBI36:3:157343662:157737230:1 gene:ENSG00000169282 transcript:ENST00000389634 CCDS3175.1 Length = 408 Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 137 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 138 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 195 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 196 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 255 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 256 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 315 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 316 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 375 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 376 GAIQVLPKMTSHVVNEIDNIL 396 >ENSP00000367323 pep:known chromosome:NCBI36:1:6028568:6083826:1 gene:ENSG00000069424 transcript:ENST00000378083 Length = 415 Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 146/338 (43%), Positives = 214/338 (63%), Gaps = 20/338 (5%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E Sbjct: 70 MKYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAE 129 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 ++G+ +K GW R S V++TK FWG +A + L+RK+++ + ASL+RLQL+YVD+ Sbjct: 130 VVLGNIIKKKGWRRSSLVITTKIFWG-GKAETE-RGLSRKHIIEGLKASLERLQLEYVDV 187 Query: 121 VFCHRPDPNTP---------------IEETVWAMSDIIARGKALYWGTSEWSADEIRAAY 165 VF +RPDPNTP IEETV AM+ +I +G A+YWGTS WS+ EI AY Sbjct: 188 VFANRPDPNTPMEGDPFSSSKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY 247 Query: 166 EIADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGV 225 +A + +L P EQ +Y++F R++VE + L+ G+G TWSPLA G+++GKY G+ Sbjct: 248 SVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI 307 Query: 226 PAGSRAEIHGYDWLRAQLTDPAKNRVVEALGE---IANDLGCTVGQLALAWVLKNPRVST 282 P SRA + GY WL+ ++ R L E IA LGCT+ QLA+AW L+N VS+ Sbjct: 308 PPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSS 367 Query: 283 VITGASRVEQIIENMRSLDVATQITPDMKQQIEQIVGD 320 V+ GAS +Q++EN+ ++ V +++ + +I+ I+G+ Sbjct: 368 VLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGN 405 >ENSP00000374287 pep:known-ccds chromosome:NCBI36:3:157321095:157737230:1 gene:ENSG00000169282 transcript:ENST00000389636 CCDS3174.1 Length = 419 Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M +R LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 148 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 149 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 206 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 207 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 266 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 267 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 326 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 327 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 386 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 387 GAIQVLPKMTSHVVNEIDNIL 407 >ENSP00000374288 pep:known-ccds chromosome:NCBI36:3:157321095:157737230:1 gene:ENSG00000169282 transcript:ENST00000389637 CCDS3174.1 Length = 419 Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 209/321 (65%), Gaps = 5/321 (1%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M +R LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 148 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 149 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 206 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 207 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 266 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 267 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 326 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 327 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 386 Query: 298 RSLDVATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 387 GAIQVLPKMTSHVVNEIDNIL 407 >ENSP00000273475 pep:novel chromosome:NCBI36:3:157343662:157737230:1 gene:ENSG00000169282 transcript:ENST00000273475 Length = 410 Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 209/323 (64%), Gaps = 7/323 (2%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 78 MAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 137 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 138 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 195 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 196 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 255 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 256 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 315 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 316 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 375 Query: 298 RSLD--VATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 376 GAIQATVLPKMTSHVVNEIDNIL 398 >ENSP00000372429 pep:novel chromosome:NCBI36:3:157321095:157737230:1 gene:ENSG00000169282 transcript:ENST00000382969 Length = 421 Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 209/323 (64%), Gaps = 7/323 (2%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M +R LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 148 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK+++ + SLQRLQL+YVD+ Sbjct: 149 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHIIEGLKGSLQRLQLEYVDV 206 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 VF +RPD NTP+EE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 207 VFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 266 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 267 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 326 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 327 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 386 Query: 298 RSLD--VATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 387 GAIQATVLPKMTSHVVNEIDNIL 409 >ENSP00000305858 pep:novel chromosome:NCBI36:3:157491520:157739237:1 gene:ENSG00000169282 transcript:ENST00000302490 Length = 431 Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 145/351 (41%), Positives = 209/351 (59%), Gaps = 35/351 (9%) Query: 1 MNYRRLGRSGLQVSELSIGSW----------------------------VTYGNQVDXXX 32 M YR LG+SGL+VS L +G+W VT+G Q+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWGNGISLITHNIRKMMMNNMQIFIILGTWVTFGGQISDEV 130 Query: 33 XXXXXXXXXXXGVNFFDNAEVYAGGKSEEIMGHALKSLGWPRISYVVSTKFFWGLAEAPN 92 GVN FD AEVYA GK+E I+G +K GW R S V++TK +WG +A Sbjct: 131 AERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWG-GKAET 189 Query: 93 QYHTLNRKYLLNAIDASLQRLQLDYVDLVFCHRPDPNTPIEETVWAMSDIIARGKALYWG 152 + L+RK+++ + SLQRLQL+YVD+VF +RPD NTP+EE V AM+ +I +G A+YWG Sbjct: 190 E-RGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWG 248 Query: 153 TSEWSADEIRAAYEIADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPL 212 TS WSA EI AY +A + ++ P EQ +Y+LF R++VE + LY G+G TWSPL Sbjct: 249 TSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPL 308 Query: 213 ASGLLTGKYRHGVPAGSRAEIHGYDWLRAQLTDP---AKNRVVEALGEIANDLGCTVGQL 269 A G+++GKY +GVP SRA + Y WL+ ++ + ++ L IA LGCT+ QL Sbjct: 309 ACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQL 368 Query: 270 ALAWVLKNPRVSTVITGASRVEQIIENMRSLD--VATQITPDMKQQIEQIV 318 A+AW L+N VS+V+ G+S EQ+IEN+ ++ V ++T + +I+ I+ Sbjct: 369 AVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQATVLPKMTSHVVNEIDNIL 419 >ENSP00000317378 pep:known chromosome:NCBI36:3:157491520:157739237:1 gene:ENSG00000169282 transcript:ENST00000320719 Length = 374 Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 128/323 (39%), Positives = 186/323 (57%), Gaps = 36/323 (11%) Query: 1 MNYRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSE 60 M YR LG+SGL+VS L +G+WVT+G Q+ GVN FD AEVYA GK+E Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAE 130 Query: 61 EIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDL 120 I+G +K GW R S V++TK +WG +A + L+RK++ Sbjct: 131 VILGSIIKKKGWRRSSLVITTKLYWG-GKAETE-RGLSRKHI------------------ 170 Query: 121 VFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQ 180 IEE V AM+ +I +G A+YWGTS WSA EI AY +A + ++ P EQ Sbjct: 171 -----------IEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQ 219 Query: 181 PQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPAGSRAEIHGYDWLR 240 +Y+LF R++VE + LY G+G TWSPLA G+++GKY +GVP SRA + Y WL+ Sbjct: 220 AEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLK 279 Query: 241 AQLTDP---AKNRVVEALGEIANDLGCTVGQLALAWVLKNPRVSTVITGASRVEQIIENM 297 ++ + ++ L IA LGCT+ QLA+AW L+N VS+V+ G+S EQ+IEN+ Sbjct: 280 ERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENL 339 Query: 298 RSLD--VATQITPDMKQQIEQIV 318 ++ V ++T + +I+ I+ Sbjct: 340 GAIQATVLPKMTSHVVNEIDNIL 362 >ENSP00000373538 pep:known chromosome:NCBI36:1:19466190:19473119:-1 gene:ENSG00000211454 transcript:ENST00000388886 Length = 319 Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 21/291 (7%) Query: 25 GNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEIMGHALKSLGWPRISYVVSTKFF 84 G ++D G D A +Y+ G+SE I+G +G ++TK Sbjct: 8 GRRMDAPTSAAVTRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVKIATK-- 65 Query: 85 WGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDLVFCHRPDPNTPIEETVWAMSDIIA 144 P ++L + + ++ SL+RLQ VDL + H PD + P+EET+ A + Sbjct: 66 ----ANPWIGNSLKPDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQ 121 Query: 145 RGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGM 204 GK + G S ++A E+ + + PT+ Q Y+ R+ VE E FG+ Sbjct: 122 EGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQ-VETELFPCLRHFGL 180 Query: 205 GLTTWSPLASGLLTGKYRHGVPAGSR--AEIHGYDWLRAQLTDPAKNRVVEALGEIANDL 262 ++PLA GLLTGKY++ G + G W K E + + L Sbjct: 181 RFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGTQWAEIYRNHFWKEHHFEGIALVEKAL 240 Query: 263 GCTVG-------QLALAWV-----LKNPRVSTVITGASRVEQIIENMRSLD 301 G AL W+ L+ VI G S +EQ+ +N+ + + Sbjct: 241 QAAYGASAPSMTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAAAE 291 >ENSP00000355377 pep:known-ccds chromosome:NCBI36:1:19481639:19488331:-1 gene:ENSG00000162482 transcript:ENST00000361640 CCDS193.1 Length = 331 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 119/287 (41%), Gaps = 21/287 (7%) Query: 25 GNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEIMGHALKSLGWPRISYVVSTKFF 84 G ++D G D A VY+ G+SE I+G LG + TK Sbjct: 20 GRRMDAPTSAAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDTK-- 77 Query: 85 WGLAEAPNQYHTLNRKYLLNAIDASLQRLQLDYVDLVFCHRPDPNTPIEETVWAMSDIIA 144 P ++L L ++ SL+RLQ VDL + H PD +TP+EET+ A + Sbjct: 78 ----AIPLFGNSLKPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQ 133 Query: 145 RGKALYWGTSEWSADEIRAAYEIADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGM 204 GK + G S ++A E+ + + PT+ Q YN R+ VE E FG+ Sbjct: 134 EGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQ-VETELFPCLRHFGL 192 Query: 205 GLTTWSPLASGLLTGKYRHGVPAGSR--AEIHGYDWLRAQLTDPAKNRVVEALGEIANDL 262 ++PLA GLLTGKY++ G + G W K E + + L Sbjct: 193 RFYAFNPLAGGLLTGKYKYEDKNGKQPVGRFFGNTWAEMYRNRYWKEHHFEGIALVEKAL 252 Query: 263 GCTVGQLA-------LAWV-----LKNPRVSTVITGASRVEQIIENM 297 G A L W+ L+ VI G S +EQ+ +N+ Sbjct: 253 QAAYGASAPSMTSATLRWMYHHSQLQGAHGDAVILGMSSLEQLEQNL 299 >ENSP00000339084 pep:novel chromosome:NCBI36:1:19503046:19511203:-1 gene:ENSG00000053371 transcript:ENST00000330072 Length = 330 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 125/289 (43%), Gaps = 30/289 (10%) Query: 48 FDNAEVYAGGKSEEIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLLNAID 107 D A +Y+ G+SE I+G LG ++TK P +L + + ++ Sbjct: 42 LDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK------ANPWDGKSLKPDSVRSQLE 95 Query: 108 ASLQRLQLDYVDLVFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRAAYEI 167 SL+RLQ VDL + H PD TP+EET+ A + GK + G S +++ E+ + Sbjct: 96 TSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTL 155 Query: 168 ADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRHGVPA 227 + PT+ Q YN R+ VE E FG+ ++PLA GLLTGKY++ Sbjct: 156 CKSNGWILPTVYQGMYNATTRQ-VETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKD 214 Query: 228 GSR--AEIHGYDWLRAQLTDPAKNRVVEALGEIANDLGCTVG-------QLALAWV---- 274 G + G W K EA+ + L G AL W+ Sbjct: 215 GKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHS 274 Query: 275 -LKNPRVSTVITGASRVEQIIENMRSLDVATQITPDMKQQIEQIVGDAY 322 L+ VI G S +EQ+ +N+ AT+ P +E V DA+ Sbjct: 275 QLQGAHGDAVILGMSSLEQLEQNL----AATEEGP-----LEPAVVDAF 314 >ENSP00000235835 pep:known-ccds chromosome:NCBI36:1:19503051:19511227:-1 gene:ENSG00000053371 transcript:ENST00000235835 CCDS194.1 Length = 359 Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/293 (28%), Positives = 126/293 (43%), Gaps = 30/293 (10%) Query: 44 GVNFFDNAEVYAGGKSEEIMGHALKSLGWPRISYVVSTKFFWGLAEAPNQYHTLNRKYLL 103 G D A +Y+ G+SE I+G LG ++TK P +L + Sbjct: 67 GHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK------ANPWDGKSLKPDSVR 120 Query: 104 NAIDASLQRLQLDYVDLVFCHRPDPNTPIEETVWAMSDIIARGKALYWGTSEWSADEIRA 163 + ++ SL+RLQ VDL + H PD TP+EET+ A + GK + G S +++ E+ Sbjct: 121 SQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAE 180 Query: 164 AYEIADRHHLRKPTMEQPQYNLFHRKRVEQEYRRLYEDFGMGLTTWSPLASGLLTGKYRH 223 + + PT+ Q YN R+ VE E FG+ ++PLA GLLTGKY++ Sbjct: 181 ICTLCKSNGWILPTVYQGMYNATTRQ-VETELFPCLRHFGLRFYAYNPLAGGLLTGKYKY 239 Query: 224 GVPAGSR--AEIHGYDWLRAQLTDPAKNRVVEALGEIANDLGCTVG-------QLALAWV 274 G + G W K EA+ + L G AL W+ Sbjct: 240 EDKDGKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWM 299 Query: 275 -----LKNPRVSTVITGASRVEQIIENMRSLDVATQITPDMKQQIEQIVGDAY 322 L+ VI G S +EQ+ +N+ AT+ P +E V DA+ Sbjct: 300 YHHSQLQGAHGDAVILGMSSLEQLEQNL----AATEEGP-----LEPAVVDAF 343 >ENSP00000367327 pep:known chromosome:NCBI36:1:6008967:6082665:1 gene:ENSG00000069424 transcript:ENST00000378087 Length = 173 Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 44/70 (62%) Query: 3 YRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEI 62 YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E + Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98 Query: 63 MGHALKSLGW 72 +G+ +K GW Sbjct: 99 LGNIIKKKGW 108 >ENSP00000367351 pep:known chromosome:NCBI36:1:5974113:6082822:1 gene:ENSG00000069424 transcript:ENST00000378111 Length = 173 Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 44/70 (62%) Query: 3 YRRLGRSGLQVSELSIGSWVTYGNQVDXXXXXXXXXXXXXXGVNFFDNAEVYAGGKSEEI 62 YR LG+SGL+VS L +G+WVT+G Q+ G+N FD AEVYA GK+E + Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 98 Query: 63 MGHALKSLGW 72 +G+ +K GW Sbjct: 99 LGNIIKKKGW 108 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0020[412022] (281 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0021[412022] (92 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0022[412022] (87 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0023[412022] (277 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0025[412022] (94 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0026[412022] (277 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0027[412022] (87 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0028[412022] (136 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0029[412022] (304 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ENSP00000340689 pep:known chromosome:NCBI36:2:191453861:19150825... 196 3e-50 ENSP00000317379 pep:known-ccds chromosome:NCBI36:2:191453842:191... 195 4e-50 ENSP00000310447 pep:known-ccds chromosome:NCBI36:12:55151004:551... 174 1e-43 >ENSP00000340689 pep:known chromosome:NCBI36:2:191453861:191508259:1 gene:ENSG00000115419 transcript:ENST00000338435 Length = 598 Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 163/293 (55%), Gaps = 11/293 (3%) Query: 13 ELAPWIGAGRVADYIPELAKVPAERFGMAVVTLDGRIHTVGDARERFSIQSISKLFACTL 72 E A G+VADYIP+LAK + +G++V T+DG+ H+ GD + F +QS K + Sbjct: 236 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVPFCLQSCVKPLKYAI 295 Query: 73 AFQLLGDALWER-VGREPSGNAFNSLVQLESERGIPRNPFINAGALIVTDVLCRRFVGAE 131 A LG R VG+EPSG FN L E ++ P NP +NAGA++VT ++ + AE Sbjct: 296 AVNDLGTEYVHRYVGKEPSGLRFNKLFLNEDDK--PHNPMVNAGAIVVTSLIKQGVNNAE 353 Query: 132 T--ALVQFMRRLTGVAELDYDLRVASSELAHAERNRAMAHFMASFGNLHMPPET----VI 185 ++QF+ ++ G + + SE +RN A+ +++ P T ++ Sbjct: 354 KFDYVMQFLNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKE--KKCFPEGTDMVGIL 411 Query: 186 DAYCRQCAIEMNCIELATAALFLANAGVAPVSGERILDASSAKRLSALMLTCGTYDAAGD 245 D Y + C+IE+ C + A LAN G P++GER+L + + +LM +CG YD +G Sbjct: 412 DFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQ 471 Query: 246 FVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSVAGVQALEQLTTL 298 F + VGLPAKSGV GGI+ V+P M + WSP LD GNSV G+ L +L Sbjct: 472 FAFHVGLPAKSGVAGGILLVVPNVMGMMCWSPPLDKMGNSVKGIHFCHDLVSL 524 >ENSP00000317379 pep:known-ccds chromosome:NCBI36:2:191453842:191538517:1 gene:ENSG00000115419 transcript:ENST00000320717 CCDS2308.1 Length = 669 Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 163/293 (55%), Gaps = 11/293 (3%) Query: 13 ELAPWIGAGRVADYIPELAKVPAERFGMAVVTLDGRIHTVGDARERFSIQSISKLFACTL 72 E A G+VADYIP+LAK + +G++V T+DG+ H+ GD + F +QS K + Sbjct: 236 ESAKKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVPFCLQSCVKPLKYAI 295 Query: 73 AFQLLGDALWER-VGREPSGNAFNSLVQLESERGIPRNPFINAGALIVTDVLCRRFVGAE 131 A LG R VG+EPSG FN L E ++ P NP +NAGA++VT ++ + AE Sbjct: 296 AVNDLGTEYVHRYVGKEPSGLRFNKLFLNEDDK--PHNPMVNAGAIVVTSLIKQGVNNAE 353 Query: 132 T--ALVQFMRRLTGVAELDYDLRVASSELAHAERNRAMAHFMASFGNLHMPPET----VI 185 ++QF+ ++ G + + SE +RN A+ +++ P T ++ Sbjct: 354 KFDYVMQFLNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKE--KKCFPEGTDMVGIL 411 Query: 186 DAYCRQCAIEMNCIELATAALFLANAGVAPVSGERILDASSAKRLSALMLTCGTYDAAGD 245 D Y + C+IE+ C + A LAN G P++GER+L + + +LM +CG YD +G Sbjct: 412 DFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQ 471 Query: 246 FVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSVAGVQALEQLTTL 298 F + VGLPAKSGV GGI+ V+P M + WSP LD GNSV G+ L +L Sbjct: 472 FAFHVGLPAKSGVAGGILLVVPNVMGMMCWSPPLDKMGNSVKGIHFCHDLVSL 524 >ENSP00000310447 pep:known-ccds chromosome:NCBI36:12:55151004:55168448:-1 gene:ENSG00000135423 transcript:ENST00000311966 CCDS8921.1 Length = 602 Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 167/300 (55%), Gaps = 14/300 (4%) Query: 7 LERIHTELAPWIGAGRVADYIPELAKVPAERFGMAVVTLDGRIHTVGDARERFSIQSISK 66 ++RI ++ G G+VA YIP+LAK + +G+++ T+DG+ H+VG + F +QS K Sbjct: 164 VDRIFEDVKELTG-GKVAAYIPQLAKSNPDLWGVSLCTVDGQRHSVGHTKIPFCLQSCVK 222 Query: 67 LFACTLAFQLLG-DALWERVGREPSGNAFNSLVQLESERGIPRNPFINAGALIVTDVLCR 125 ++ LG D + + VG+EPSG +N L +E GIP NP +NAGA++V+ ++ Sbjct: 223 PLTYAISISTLGTDYVHKFVGKEPSGLRYNKLSL--NEEGIPHNPMVNAGAIVVSSLIKM 280 Query: 126 RFVGAETA--LVQFMRRLTGVAELDYDLRVASSELAHAERNRAMAHFMASFGNLHMPPET 183 AE ++Q++ ++ G + + SE +RN A+ +++ P+ Sbjct: 281 DCNKAEKFDFVLQYLNKMAGNEYMGFSNATFQSEKETGDRNYAIGYYLKEKKCF---PKG 337 Query: 184 V-----IDAYCRQCAIEMNCIELATAALFLANAGVAPVSGERILDASSAKRLSALMLTCG 238 V +D Y + C++E+ C + A LAN G+ P++GE +L A + + +LM +CG Sbjct: 338 VDMMAALDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCG 397 Query: 239 TYDAAGDFVYRVGLPAKSGVGGGIVAVLPGEMAVCVWSPGLDANGNSVAGVQALEQLTTL 298 YD +G F + VGLPAKS V G I+ V+P M + SP LD GNS G ++L +L Sbjct: 398 MYDFSGQFAFHVGLPAKSAVSGAILLVVPNVMGMMCLSPPLDKLGNSHRGTSFCQKLVSL 457 BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= BMA10229_0030[412022] (117 letters) Database: Homo_sapiens.NCBI36.45.pep.all.fa 43,570 sequences; 22,086,541 total letters Searching..................................................done ***** No hits found ****** BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution ma