Replicon Accession Replicon Name Locus tag RefSeq Accession RefSeq GI (protein ID) Category Start Stop Gene name altGeneName Product name altProteinName Product Name Rating Nucleotide Sequence Amino Acid Sequence comment evidenceReferences genomicContext homology structureFeature pathway ecNumber functionClass localization localizationClassConfidence geneOntology tigrfamAccession tigrfamName tigrfamFunction tigrfamIsologyType tigrfamSignificance tigrfamEcNumber tigrfamRole tigrfamSubRole pfam pfamDescription cog cogDescription COG_Category primaryFunctionClassID NC_008542 Chromosome1 Bcen2424_0001 YP_833648 116688025 Protein 178 1755 chromosomal replication initiator protein DnaA ATGAACGATTTCTGGCAACACTGTTCCGCACTGCTGGAGCGCGAGCTAACGCCCCAGCAGTACGTGACGTGGATCAAACCCTTGGCCCCGGTGGCCTTCGATGCGTCGGCGAACACGCTGTCCATCGCCGCGCCGAACCGCTTCAAGCTGGACTGGGTCAAGAGCCAGTTTTCGGGCCGGATCTCCGATCTGGCCCGCGAATTCTGGAACACGCCGATCGAAGTCCAGTTCGTCCTCGATCCGAAGGCCGGCATGCGCAGCGCCGCCGCGAGCGCCGCGCCGGCTGCTCCGCGTGCGCCGCTGACGCCCGGCGGCCCGGCCGCGACGGTCGCCGCGATCGCCGCCAACCTGACCGCGAATGCCGCTGCCGCGCCCAGCGCGCCGGCCGACGTGCCGATGACGCCGTCGGCGGCCGCCGCGCACCACCTGAACGCCGACGACGCCGACATCGACCTGCCGAGCCTGCCCGCGCACGAAGCGGCAGCCGGCCGCCGCACGTGGCGTCCGGGCCCCGGCGCCGCGCCCGCGAACGGCGGCGAAGCCGATTCGATGTACGAACGTTCGAAGCTGAACCCGGTGCTCACGTTCGACAACTTCGTGACCGGCAAGGCGAACCAGCTCGCGCGCGCCGCCGCGATCCAGGTCGCGGACAACCCGGGCATCTCGTACAACCCGCTGTTCCTGTACGGCGGCGTCGGCCTCGGCAAGACCCACCTGATCCACGCGATCGGCAACCAGCTGCTGCTCGACAAGGCCGGCGCGCGCATCCGCTACATCCACGCCGAGCAATACGTGTCGGACGTGGTGAAGGCGTACCAGCGCAAGGCGTTCGACGACTTCAAGCGCTACTACCATTCGCTCGACCTGCTGCTGATCGACGATATCCAGTTCTTCTCCGGCAAGTCGCGCACGCAAGAGGAATTCTTCTACGCGTTCGAGGCGCTCGTCGCGAACAAGGCGCAGGTGATCATCACCAGCGACACGTATCCGAAGGAAATCTCCGGCATCGACGATCGCCTGATCTCGCGCTTCGACTCGGGCCTCACCGTCGCGATCGAACCGCCCGAGCTGGAAATGCGCGTCGCGATCCTGATGCGCAAGGCGCAGTCGGAAGGCGTGAACCTGTCGGAAGACGTCGCGTTCTTCGTCGCGAAGCACCTGCGCTCGAACGTGCGCGAACTCGAAGGCGCGCTGCGCAAGATCCTCGCGTATTCGAAGTTCCACGGCCGCGAGATCTCGATCGAGCTGACCAAGGAAGCGCTGAAGGACCTGCTGACCGTGCAGAACCGGCAGATTTCGGTCGAGAACATCCAGAAGACCGTCGCCGACTTCTACAACATCAAGGTCGCGGACATGTACTCGAAGAAGCGCCCCGCGAACATCGCGCGGCCGCGGCAGATTGCGATGTACCTGGCGAAGGAACTCACGCAGAAGAGCCTGCCGGAAATCGGCGAGCTGTTCGGCGGGCGCGATCACACCACCGTGCTGCACGCGGTGCGCAAGATCGCCGACGAGCGCAGCAAGGACGCGCAGCTCAACCACGAGCTGCACGTGCTGGAACAGACGCTGAAGGGCTGA MNDFWQHCSALLERELTPQQYVTWIKPLAPVAFDASANTLSIAAPNRFKLDWVKSQFSGRISDLAREFWNTPIEVQFVLDPKAGMRSAAASAAPAAPRAPLTPGGPAATVAAIAANLTANAAAAPSAPADVPMTPSAAAAHHLNADDADIDLPSLPAHEAAAGRRTWRPGPGAAPANGGEADSMYERSKLNPVLTFDNFVTGKANQLARAAAIQVADNPGISYNPLFLYGGVGLGKTHLIHAIGNQLLLDKAGARIRYIHAEQYVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKSRTQEEFFYAFEALVANKAQVIITSDTYPKEISGIDDRLISRFDSGLTVAIEPPELEMRVAILMRKAQSEGVNLSEDVAFFVAKHLRSNVRELEGALRKILAYSKFHGREISIELTKEALKDLLTVQNRQISVENIQKTVADFYNIKVADMYSKKRPANIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIADERSKDAQLNHELHVLEQTLKG KEGG: bcn:Bcen_2553 chromosomal replication initiator protein DnaATIGRFAM: chromosomal replication initiator protein DnaAPFAM: Chromosomal replication initiator, DnaA C-terminal domain ; Cytoplasmic Class 3 GO:0006275 ; TIGR00362 DnaA chromosomal replication initiator protein DnaA equivalog 4.3e-134 DNA metabolism DNA replication, recombination, and repair PF00308 Bac_DnaA, Bacterial dnaA protein.. COG0593 DnaA, ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0002 YP_833649 116688026 Protein 1926 3032 DNA polymerase III, beta subunit ATGCAACTGGTCAAGACCGAACGAGACACCCTCCTCAGGCCGCTGCAAACGGTCAGCGGCATCGTCGAACGCCGCCATACGTTGCCGATCCTCGCCAACCTGCTGATCACCAAGAACGGCCCGGACGTTTCATTCCTGTCGACCGACCTGGAGCTGCAGATCACCACGCGCGCCGATTTCGGCGTCGGCGGCGACCAGATCGCGACCACCGTCGCGGCCCGCAAGCTGCTCGACATCCTGCGCGCGATGCCTGACGGCCAGGTCACGCTGTCGCTCGCCGACAAGCGCCTCACCGTTCAATCGGGCAAGAGCCGTTTCGCGCTGCAGACGCTGGCGGCCGACGAGTTCCCGACCGTCGCGCAGGCGAAGGATTTCGGCGCCACGCTGACCGTCCCGCAGAAGTCGTTCCGCCAGTTGCTCGGCATGGTGCACTTCGCGATGGCGCAGCAGGACATCCGCTACTACCTGAACGGCATGCTGCTCGTCGTCGACGGCGACCAGCTGATGGCCGTGGCCACCGACGGCCACCGCCTCGCGTTCTCGTCGATGAAGCTCGAAGGCGGCACGTTCGGCCGCCAGGAAGTCATCGTGCCGCGCAAGACGATTCTCGAGCTGCAGCGCCTGCTCGAAGACATCGACGACACCGTCACCATCGACATCGCGCAAACCCAGGCCAAGTTCACGTTCGGCCAGGTCGAGCTCGTGTCGAAACTCGTCGAGGGCAAGTTCCCCGACTTCCAGCGCGTGATCCCGAAGGCGCACAAGAACACGTTCGAGATCGGCCGTGAAGAACTGCAGCGTTCGCTGCAGCGCGCGGCGATCCTGACCTCGGACAAGTTCAAGGGCGTGCGCTGCATCATCGCGCCGGGCCAGCTGAAGATCATGTCGACCAACGCCGATCAGGAAGAGGCGCAGGAAGAACTCGAAATCGCCTACCAGGGCGATACCGTCGACATCGGCTTCAACGTCACGTATCTGCTCGACGTGCTCGCGAACCTGAAGGTCGACACCGTGCAGGTGAGCCTCGGCGACGCCAGCTCGAGCGCGCTGATCACCGTGCCCGAGAACGACGAGTTCAAGTATGTCGTGATGCCGATGCGCATCTGA MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADFGVGGDQIATTVAARKLLDILRAMPDGQVTLSLADKRLTVQSGKSRFALQTLAADEFPTVAQAKDFGATLTVPQKSFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGDQLMAVATDGHRLAFSSMKLEGGTFGRQEVIVPRKTILELQRLLEDIDDTVTIDIAQTQAKFTFGQVELVSKLVEGKFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKIMSTNADQEEAQEELEIAYQGDTVDIGFNVTYLLDVLANLKVDTVQVSLGDASSSALITVPENDEFKYVVMPMRI KEGG: bcn:Bcen_2554 DNA polymerase III, beta subunitTIGRFAM: DNA polymerase III, beta subunitPFAM: DNA polymerase III, beta chain ; 2.7.7.7 ; Cytoplasmic Class 3 GO:0009360 ; TIGR00663 dnan DNA polymerase III, beta subunit equivalog 4.3e-93 2.7.7.7 DNA metabolism DNA replication, recombination, and repair PF02767 DNA_pol3_beta_2, DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.. COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0003 YP_833650 116688027 Protein 3224 5698 DNA gyrase, B subunit ATGAGTGAACAGCACAATTCGCAACCCGATAACAGCAGCTACGGCGCTTCGTCGATCCAGATCCTCGAAGGTCTGGAAGCGGTGCGCAAGCGCCCCGGGATGTACATCGGCGACACGTCGGACGGCACCGGTCTGCACCACCTCGTGTTCGAGGTGCTCGACAACTCGATCGACGAAGCGTTGGCCGGGTACTGCAACGACATCCACGTGACGATTCACGCCGACAACTCGATTTCTGTGACCGACAACGGCCGCGGGATTCCGACCGACGTGAAGATGAACGACAAGCACGAGCCGAAGCGCAGCGCCGCCGAGATCGTGATGACCGAGCTGCACGCCGGCGGCAAGTTCGACCAGAACAGCTACAAGGTGTCGGGCGGCCTGCACGGCGTGGGCGTGTCGTGCGTGAACGCGCTGTCGAGCTGGCTGCGCCTCACCGTCCGCCGCGACGGCAAGAAGCGCTTCATGGAATTCCACCGCGGCGTCGCGCAGGATCGCGTGCTCGAAGTGGTGGACGGCGTGGAAGTGTCGCCGATGCTCGTGACCGGCGACACCGAGAACCGCGGCACCGAAGTGCATTTCATGGCCGATCCGACCATTTTCGGCACGGTCGAGTATCACTACGACATTCTCGCGAAGCGGATGCGCGAGCTTTCGTTCCTGAACAACGGCGTGCGGATTCGTCTGACCGACCTGCGCTCGGGCAAGGAAGACGATTTCGCGTTCGCCGGCGGTGTGAAGGGCTTCGTCGAGTACATCAACAAGACGAAGACCAACCTGCACCCGACCGTGTTCTTCGCCAACGGCGAGAAGGACGGCGTGGGCGTCGAAGTCGCGATGCAGTGGAACGACAGCTACAACGAGAACGTGCTGTGCTTCACGAACAACATTCCGCAGCGCGACGGCGGCACGCACCTGACCGGCCTGCGGGCCGCGATGACGCGCGTCATCAACAAGTACATCACCGACAACGAAATCGCGAAGAAGGCGAAGGTCGAGACGACCGGCGACGACATGCGCGAAGGGCTGTCGTGCGTGCTCTCCGTGAAGGTGCCGGAGCCGAAGTTCAGCTCGCAGACGAAGGACAAGCTGGTTTCTTCCGAGGTTCGTGCGCCGGTTGAGGAAGTTGTGGCGAAGGCACTGGAAGAGTTCCTGCTGGAGACGCCGATCGACGCGAAGATCATCTGCGGGAAGATCGTCGAAGCCGCGCGGGCGCGTGATGCTGCTCGGAAGGCCCGTGAGATGACGCGTCGGAAGGGTGTGCTCGATGGCGTCGGCCTGCCCGGCAAGCTCGCGGACTGCCAGGAGAAAGACCCGGCGAAGTGCGAAATCTACATCGTCGAGGGTGACTCGGCAGGTGGGTCGGCGAAGCAAGGGCGTGATCGCAAGTTCCAGGCGATTCTGCCGCTGCGCGGCAAGGTGCTGAACGTCGAGAAGGCGCGCTACGACAAGCTGCTGTCGTCGGAGCAGATCGTCACGCTCGTGACCGCGCTTGGGTGCGGCATCGGCAAGGAAGACTACAACCTCGACAAGCTGCGCTATCACCGCATCATCATCATGACCGACGCGGACGTCGACGGTGCGCACATCCGGACGCTGCTGCTCACGTTCCTGTATCGCCAGATGCCGGACATGATCGAGCGCGGGTACGTGTATATCGCGCAGCCGCCGCTTTACAAGATCAAGGCGGGCAAGGACGAGCGGTATCTGAAGGACGACGTCGAGCTCAACGCGCACATGCTGCGGTTGGCGCTGCAAGGGTCGGAGCTGGTGCCGGGTGAGAATGCGGCGGCGATTTCGGGTGATGCGCTTGGGGAACTGGCGCGGTCGTATCTGCTGTCGCAGAGCGTGATCGATCGGTTGAGCCGGTTGTATGACCCGGCTGCGCTGGAAGCGGTCATGGATGGCGTGGTGATCGATCTCTCCAATGAGGAGTCGACCGAGGCTTCGGCTAAGGCGCTGCATGCTGCGTTGCATGATGAAGCGCTGAAGAACGAAGTGCGGGTGGTGCCTTCGTATGACGCGGTTCGCGAACAGCGGGCGCTGCATGTCGAGCGCACGCATCACGGCAACGTGCGCGTTTCGGTCATCGACCAGGAATTCCAGCACACGGCGGATTATCAGCAGCTCGTGACCACCGCGAATACGTTCAAGGGGCTGATTGGGGAAGGTGCGGTCATCAAGCGCGGTGAGCGCAGCATGGCCGTGGCGGACTTCAAGAGCGCGATGAAGTGGCTGCTGGCGGATGCTGAGCGGAACGTGTCGAAGCAACGCTATAAGGGGCTCGGCGAGATGAACCCCGAGCAGCTGTGGGAAACGACGATGGATCCGGCCGTGCGGCGTCTGCTGCGTGTGCAGATCGAAGACGCGATTGCTGCGGATGGGATCTTTACTACGCTGATGGGGGATGACGTCGAGCCGCGGCGGGCGTTTATCGAGTCGAATGCGTTGCGGGCGGGGAATATTGACGTTTAA MSEQHNSQPDNSSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGYCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEVVDGVEVSPMLVTGDTENRGTEVHFMADPTIFGTVEYHYDILAKRMRELSFLNNGVRIRLTDLRSGKEDDFAFAGGVKGFVEYINKTKTNLHPTVFFANGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEEVVAKALEEFLLETPIDAKIICGKIVEAARARDAARKAREMTRRKGVLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFLYRQMPDMIERGYVYIAQPPLYKIKAGKDERYLKDDVELNAHMLRLALQGSELVPGENAAAISGDALGELARSYLLSQSVIDRLSRLYDPAALEAVMDGVVIDLSNEESTEASAKALHAALHDEALKNEVRVVPSYDAVREQRALHVERTHHGNVRVSVIDQEFQHTADYQQLVTTANTFKGLIGEGAVIKRGERSMAVADFKSAMKWLLADAERNVSKQRYKGLGEMNPEQLWETTMDPAVRRLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV KEGG: bcn:Bcen_2555 DNA gyrase, B subunitTIGRFAM: DNA gyrase, B subunitPFAM: DNA gyrase, subunit B domain protein ; 5.99.1.3 ; Cytoplasmic Class 3 GO:0009387 ; TIGR01059 gyrB DNA gyrase, B subunit equivalog 0 5.99.1.3 DNA metabolism DNA replication, recombination, and repair PF00204 DNA_gyraseB, DNA gyrase B. This family represents the second domain of DNA gyrase B which has a ribosomal S5 domain 2-like fold. This family is structurally related to PF01119.. COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0004 YP_833651 116688028 Protein 6509 8014 Integrase, catalytic region GTGGGCATATTGGCCAAGATCAGGCGGATGTATTTCCGCGAGAAGGTCCCGCTGCGCGAGATTGCGCGGCGTACGGGCCTGTCCCGAAACACAGTGCGCCGCTGGCTGCGGCAGACTGATGCCGTCGAGCCGAAGTATCCGAAGCGCGTCAGCCCGAGCGTCATCGACGACTGGGCCGCACAGCTGACAGGTTGGCTGCGTGCCGACAGTCATCGCCCGAAGCGTGACCGGCGCACCGCCCGGTTCATGTTCGAGGCGATCCGCGCCGAGGGTTACGCCGGCAGCTACGGCCGCGTGAGCGCGTTCGTGAGGCGTTGGCACGAGGAGCAGGCTGAGGCGCCTCGCAGGAAGGCCTTCGTGCCGCTCGCCTTCGAACCCGGCGAAGCCTTCCAGTTTGACTGGAGCTGCGAATACGCGTTTGTTGGCGGGCTACGGCGACGCCTGGAGGTCGCCCACGTCAAACTTAACTCCAGCCGCGCGTTCTGGCTCGTCGCCTATCCCACCCAGAGTCACGAGATGCTGTTCGACGCACACGCCCGCGCATTCGCCGCGTTCGGCGGCGTGCCCCGGCGCGGCATCTACGACAACATGAAGACCGCTGTGGACAAGGTTGGCCGCGGCAAGGAGCGTGCGGTCAACGCGCGCTTCGAAGCAATGTGCAGTCACTACCTGTTCGAGCCAGAGTTCTGCAATCGGGCGGCAGGTTGGGAGAAAGGCATCGTCGAGAAGAACGTTCAGGACCGGCGGCGTCAGATCTGGCACGAAGCATCGCTACGGCGCTGGGAAACGCTGGAGATCCTAAACGAATGGGTCGCTGGTCAGTGTCGTGAGGCGTGGCACATGCGGCACCCGCAGTGGCCTGAGCTGACAGTCGAGGATGTGCTGCAGGACGAGCGTACCCGGCTGATGCCCAATCCACGGCCGTTCGACGGCTATGTCGAGCAGACCCTGCGAGTCTCGTCGACCAGCCTGATTCACTTCCAACGCAACCGCTACAGCGTGCCCACCGAGTACACGAACCAGTTGGTGAGCGTGCGCTGCTATCCGGCATATCTCAGCGTCGTCGTCAACGCCCAGGAGATCGCACGCCACGAACGCAGCTTCGAGCGGCACATGACCTTCTACGATTGGCGCCACTACATCACGCTGGTCGAGCGCAAACCCGGCGCACTGCGCAACGGCGCACCGTTCATCACGATGCCGCAGCCGCTGCAACTGCTGCAGCGGCATCTGCTGAAACACCCGGGCGGCGATCGCGTCATGACGCAGGTGCTCGCTGCGGTGCGCGAACACGGGCTCGATGCGGTGCTGCTCGCCGTACAGGCTGCGCTGGATTCAGGACGCCCCAGCGCAGAGCACGTCCTGAACGTGCTGAGCCGGCTGAAGGCGCCCGTCACGAATGGCAGGCTCGCCACGACGAAACTCCAGCTCAAGGAAGAGCCCGCGGCCGACGTGGGCCGTTACGAGACGCTGCGCGCCAACCCACCGGAGGATCGTCATGTCTAA MGILAKIRRMYFREKVPLREIARRTGLSRNTVRRWLRQTDAVEPKYPKRVSPSVIDDWAAQLTGWLRADSHRPKRDRRTARFMFEAIRAEGYAGSYGRVSAFVRRWHEEQAEAPRRKAFVPLAFEPGEAFQFDWSCEYAFVGGLRRRLEVAHVKLNSSRAFWLVAYPTQSHEMLFDAHARAFAAFGGVPRRGIYDNMKTAVDKVGRGKERAVNARFEAMCSHYLFEPEFCNRAAGWEKGIVEKNVQDRRRQIWHEASLRRWETLEILNEWVAGQCREAWHMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQTLRVSSTSLIHFQRNRYSVPTEYTNQLVSVRCYPAYLSVVVNAQEIARHERSFERHMTFYDWRHYITLVERKPGALRNGAPFITMPQPLQLLQRHLLKHPGGDRVMTQVLAAVREHGLDAVLLAVQAALDSGRPSAEHVLNVLSRLKAPVTNGRLATTKLQLKEEPAADVGRYETLRANPPEDRHV PFAM: Integrase, catalytic regionKEGG: bcn:Bcen_4956 integrase, catalytic region ; Cytoplasmic Class 3 PF00665 rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyses the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.. COG4584 COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0005 YP_833652 116688029 Protein 8007 8804 IstB domain protein ATP-binding protein ATGTCTAACGATATCGCGGCCCAGCTCAAGGGTCTTAAACTGCACGGCATGGCGAGCACATGGCCGGAGCTGCTCGCGCAGTCGCGTCACACTGACTTCGAGCCGGAGCGCTTCATGAAGCAGCTGTTGATGGCTGAAACCGCCGAACGGCAGGTGCGCTCGATCGCCTATCAAATGACCGCTGCGCGCTTCCCGGCACACCGCGACCTGAAGGGCTTCGACTTCGCGCAGGCACACGTCGACGAAGCGCTGGTGCGCGAACTGAGCGAGCTGTCGTTCCTCGCAAGCGCGCACAACGTCGTGTTCATCGGTGGTCCGGGCACTGGCAAGACGCACCTCGCCTCAGCGATCGGAATCGAAGCCGTACAGCGCCACGGCAAGCGTGTGCGCTACTTCTCGACCGTCGAGCTGACCAACGCCCTGGAGCAGGAGAAGTCCATCGGCAAACAAGGCCAGATTGCCCACAAGCTGATGTACGTCGATCTGGTGATCCTCGACGAACTGGGCTATCTGCCGTTCAGCCAGACCGGCGGTGCATTGCTGTTCCATCTGCTCTCAAAGCTATACGAGCACACGAGCGTCGCGATCACGACCAATCTCAGCTTCGGCGAGTGGGCGAGCGTGTTCGGCGATGCAAAGATGACGACAGCGCTGCTGGACCGCGTCACCCATCACTGCCACATCGTCGAAACGGGCAATGAATCGTGGCGCTTCAGGACCAGTTCTGCCAAGGCAAAGACAACAAGAAAAAGAGCGGAAAAACCAGCGGGTAACGAAGAGTTATCCACACCGGAATAG MSNDIAAQLKGLKLHGMASTWPELLAQSRHTDFEPERFMKQLLMAETAERQVRSIAYQMTAARFPAHRDLKGFDFAQAHVDEALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIEAVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYVDLVILDELGYLPFSQTGGALLFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRTSSAKAKTTRKRAEKPAGNEELSTPE PFAM: IstB domain protein ATP-binding proteinSMART: AAA ATPaseKEGG: bcn:Bcen_4955 IstB-like ATP-binding protein ; Cytoplasmic Class 3 PF01695 IstB, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.. COG1484 DnaC, DNA replication protein [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0006 YP_833653 116688030 Protein 8987 8871 DNA (cytosine-5-)-methyltransferase ATGGGCTTCGAAGCACACGGAGGTGAATGCGTCTTCACAAGTGAATGGAACGACTTTTCGAAGAAGACCTATCTAGAGAACTATGGGGATCGTCATCCGTTCGTTGGCGATTGTTGA MGFEAHGGECVFTSEWNDFSKKTYLENYGDRHPFVGDC KEGG: bcn:Bcen_2558 DNA (cytosine-5-)-methyltransferase ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0007 YP_833654 116688031 Protein 9308 9568 transposase IS3/IS911 family protein ATGAAAAAGCGATTCACCGAAGAACAGATCATCGGCATCTTGAAGGAAGCCGAGGCTGGCTTGAAGCCGGCGGAGCTGTGCCGCAAGTACGGCATCTCGGAAGCGACCTACTACAACTGGAAAGCGAAGTTCGGCGGGATGACGGTCTCCGAAGCGCAGCGCCTGAAGGAACTGGAGCAGGAGAACAACAAGCTCAAGCGCCTGTTGGCCGAATCAATGCTCGACAACGCCGCGCTGAAGGACCTGCTGGCTCGAAAGTAG MKKRFTEEQIIGILKEAEAGLKPAELCRKYGISEATYYNWKAKFGGMTVSEAQRLKELEQENNKLKRLLAESMLDNAALKDLLARK PFAM: transposase IS3/IS911 family proteinKEGG: bcn:Bcen_2559 transposase IS3/IS911 ; Unknown Class 3 PF01527 Transposase_8, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.. NC_008542 Chromosome1 Bcen2424_0008 YP_833655 116688032 Protein 9607 9924 putative insertion element protein ATGACCGAACGTGCCATGGGTGTTACCCGGGCCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTCCACTACGAATCACGCCGCCGAGTTGATGACGAAGCGCTGACTGGCCGGATGATGGCCATCGCCGCGCAGAAGCGCCGCTACGGCTATCGCCGGATTCACGTGCTGTTGCAGCGGGATGGCTGCTTCGCCAACCACAAGCGCATCTGGCGCCTGTACAGCAAGGCGGGGCTGAGCGTGCGCAAGCGGCGACGCAAGCGTATTGCGGCTGTCGAGCGCACGCCGCTGCCGTTAGCTATTCGGCACGAAGTGTGA MTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAIAAQKRRYGYRRIHVLLQRDGCFANHKRIWRLYSKAGLSVRKRRRKRIAAVERTPLPLAIRHEV KEGG: bcn:Bcen_2560 putative insertion element protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0009 YP_833656 116688033 Protein 16187 15657 cytochrome B561 ATGAAGGCTTCGACGACGTTTAGTTTGCCGGCGCGGGTGCTGCACTGGGTGATGGCCGCGATGATCCTCGCGATGCTGTTCATCGGGGTGGGGATGGTGGCGTCGGTTTCCGGGCGGCACGAGATCCTGGTGGCGATTCACAAGCCGCTGGGCGTGGCCGTACTGGTGCTGGTGTGCGTGCGGATCGTGGTGCGGATGCTGTCGAAGCCGCCGGCGTTGCCCGAGGATCTGCCGTGGTGGCAGAAGGTGGCTGCGCACGGTTCGCATCTCGTGCTGTATGCGCTGATGGTCGCGATGCCGCTGATCGGCTGGGCGATGCTGTCGGCGGGCGGGTATCCGGTGACGTTGGGCGGCGGCGTGCAGTTGCCGGCGCTGGTGTCGGCTGATCCAGTGACGTTCGCGTGGCTCCGGGTTGCGCATCGCGTGCTGGCGTATCTGTTCTTCCTGACGTTCCTCGCACACTTTGCTGCGGCGCTGTATCACGGGCTGATTCGGCGGGACGGCGTGGTGAGGGCGATGGTCGGGCGGTAA MKASTTFSLPARVLHWVMAAMILAMLFIGVGMVASVSGRHEILVAIHKPLGVAVLVLVCVRIVVRMLSKPPALPEDLPWWQKVAAHGSHLVLYALMVAMPLIGWAMLSAGGYPVTLGGGVQLPALVSADPVTFAWLRVAHRVLAYLFFLTFLAHFAAALYHGLIRRDGVVRAMVGR PFAM: cytochrome B561KEGG: bcn:Bcen_0062 cytochrome b561 ; Cytoplasmic Membrane Class 3 PF01292 Ni_hydr_CYTB, Cytochrome b561 family. This family includes cytochrome b561 and related proteins as well as the nickel-dependent hydrogenases b-type cytochrome subunit.. COG3038 CybB, Cytochrome B561 [Energy production and conversion]. Energy production and conversion NC_008542 Chromosome1 Bcen2424_0010 YP_833657 116688034 Protein 17272 16187 Catalase domain protein ATGAAGCAATCTTCTTCTTCGCCGCAGCGCGAGCCCGGGCGCGGGTGGTGGCGCTGGGCCGTGATCGGCGGCGCGGTGGCCGGCGTGGCTGCGGCGTTCGGGTATGCCGGCGGGTGGCTCGCGCCGGCGCGTCTGACCCCGCACCGGCTCGTCGACGCGCTGCAGACCAACAGCGGTATCCATCCCGGCTACCGGCGCAATCACGCGAAGGGCGTGTGCGTGACCGGCTACTTCGAAGGCAACGGCGCCGCGAGCGCGTATTCGGTCGCGCCGTTCTTCAAGGCGGTGCGCACGCCGGTGGTCGGGCGCTTCGCGTTGCCGGGCGGGAATCCTTATGCGCCCGACAGCAGCGTGCCGATCCGCAGCCTCGCGCTGAAGCTGACCGCACCGGACGGCCAGCAATGGCGGACGGGGATGAACGCGATGCCGGTGTTTCCCGTCGCGACGCCACAGGCGTTCTACGAGCAGACGCTCGCGACCCGGCCCGATCCGAAGACGGGCAAGCCGGACCCGGCAAAGGTGAAGGCGTTCTTCGGCGCGCATCCGGAAGCGGGCGCGTTCCTGCAATGGGTGAAGGGTGCGAAGCCGAGCGCGAGCTACGTCACCGAAAGCTATTACGGGCTGAACGCGTTCTACTTCGTCGACGTGGCCGGCAAGCGCCAGGCAGTGCGGTGGCGCGTCGTGCCGGAGCAGACGGCGGGCGCCGGTGACGTCGCGACGGCCGCGGACCCGAACGTACTGCAACAGGACGTGACGCAGCGCATCGCGGCCGGCCCGCAGAAGTGGAAGCTGCTGGTCACGCTGGCGGAGCCCGGCGACCCGGTGGACGACGCGACGAAGATCTGGCCCGCGCAGCGCACGACGATCGATGCGGGCACGCTCGTGCTCGACCGCGTGGAGGCGCAGGACAGCGGCCCGTGCCGCGACGTGAACTACGACCCGACGGTGCTGCCGCAGGGAATTCAGGTATCGGGCGATCCGTTGCTGGCGGCGCGCTCGGCCGCGTATGCGGATTCGTATTTGCGGCGCACGAGTGAAGAGGCCGGCGTGGCAGGCGTGGCGCGAGTAAGTGGGGAGGGACGGTGA MKQSSSSPQREPGRGWWRWAVIGGAVAGVAAAFGYAGGWLAPARLTPHRLVDALQTNSGIHPGYRRNHAKGVCVTGYFEGNGAASAYSVAPFFKAVRTPVVGRFALPGGNPYAPDSSVPIRSLALKLTAPDGQQWRTGMNAMPVFPVATPQAFYEQTLATRPDPKTGKPDPAKVKAFFGAHPEAGAFLQWVKGAKPSASYVTESYYGLNAFYFVDVAGKRQAVRWRVVPEQTAGAGDVATAADPNVLQQDVTQRIAAGPQKWKLLVTLAEPGDPVDDATKIWPAQRTTIDAGTLVLDRVEAQDSGPCRDVNYDPTVLPQGIQVSGDPLLAARSAAYADSYLRRTSEEAGVAGVARVSGEGR PFAM: Catalase domain proteinKEGG: bcn:Bcen_0061 catalase-like ; Unknown (This protein may have multiple localization sites) Class 3 PF00199 Catalase, Catalase.. COG0753 KatE, Catalase [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008542 Chromosome1 Bcen2424_0011 YP_833658 116688035 Protein 17431 17952 RNA polymerase, sigma-24 subunit, ECF subfamily ATGCCCTCCACCGCCCTCGACGACGAAGCATTGCGCGAACTCATCCCCAGGCTGCGACGCTTCGCACTCTGGCTGGCGCGCGACGTCCACGCGGCCGACGATCTCGTCCAGTCGACGCTCGAGCGCGCACTGTCGCGCTGGACGAGCCGTCGCGACGACGCATCGCTGCGCAGCTGGCTCTTCACCATCCTGTACCGGCAATTTCTCGACGGCAAACGCAGCGCGAAGCGCTACAGCTGGCTGCTCGGCCGCATTCGCGACGACGACGAAGCGCACTGGCCGTCCGCCGAACGCGAATTCGCGGCGCGCGCGACGCTCGAAGCGTTCGGCCGGCTCTCGGACGAACAGCGAAGCCTGCTGCTGCTCGTCGCGGTCGAAGGCTTCACCTATCAGGAAGTCGCCGACCTGCTCGAGGTGCCGATCGGCACGGTGATGTCGCGGCTCTCCCGCGCGCGCCAGGCGCTGCGCCAGCTCAGCGACGGCGAACTTCCTGCTCCTTCCTTGCGGCTGATGAAGAAATGA MPSTALDDEALRELIPRLRRFALWLARDVHAADDLVQSTLERALSRWTSRRDDASLRSWLFTILYRQFLDGKRSAKRYSWLLGRIRDDDEAHWPSAEREFAARATLEAFGRLSDEQRSLLLLVAVEGFTYQEVADLLEVPIGTVMSRLSRARQALRQLSDGELPAPSLRLMKK PFAM: sigma-70 region 2 domain protein ; Unknown Class 3 PF04545 Sigma70_r4, Sigma-70, region 4. Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix families. Therefore there are many false negatives. . COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0012 YP_833659 116688036 Protein 17949 18707 putative transmembrane anti-sigma factor ATGAACACCCCTCCGAACGAACATGACCTTCAGGCCTATGTCGACGGCCAACTCGACGACGATGCGCGCGCAGCGGTCGAGCGTTATCTCGCGCTGCATCCGGAGCGCGCGGAACAGGTGAAGCAATGGCAGCAGGACGCGCAGCGGTTGCGGGCCGCGCTGGAGAGCGTGCGGATGCCGGCCGATAACCCTGCGCTGGATCCGGCCGCGATTCGTGGCCGACGGGCCGAGCGCGCGCGGATGCGGTTCGCGATGGCGGCTTCGTTCGTGTTCTGCGTCGGGCTCGGGACGTTCGGCGGATGGCAGGCGCGCGGGTGGAACGCGCCGCCGCCCATCGCGCCGATGAGCGATGCGGTCAAGGCTTACCAGATGATGGTGGTCGATCGGACGGCCAAGGTCGATTACCGGCCGACCGGTGCGGGCGATTTGCAGGGGTGGCTCACCAAAGGCGTGGGCGCATCGGCGAAGCTGCCGGATTTGAGCGCGGCGGGGTTCAGGCCGGTCGGTGGGCGGCTGTTCACGACGGACAGCGGCGCTACTGCTGCGATGGTGCTCTATCAGGATGACGCGGGACGGACGTTGAGCTTCTATCTCCGGCCGGCGGAATCGAAACATCGGCTGCTGCCGAATGGGCAACGGGTGGATGGCGCGCTGCTGGCGCGGTATGGCTCGGTGAACGGGCTCAACTATGCGGTGGTCGGGCCGGCCGGGAGTCTCGGCGAGAAGGCGGTCGTGCAGGCGCTCGATCAGCAGACTTGA MNTPPNEHDLQAYVDGQLDDDARAAVERYLALHPERAEQVKQWQQDAQRLRAALESVRMPADNPALDPAAIRGRRAERARMRFAMAASFVFCVGLGTFGGWQARGWNAPPPIAPMSDAVKAYQMMVVDRTAKVDYRPTGAGDLQGWLTKGVGASAKLPDLSAAGFRPVGGRLFTTDSGATAAMVLYQDDAGRTLSFYLRPAESKHRLLPNGQRVDGALLARYGSVNGLNYAVVGPAGSLGEKAVVQALDQQT KEGG: bcn:Bcen_0059 putative transmembrane anti-sigma factor ; Unknown Class 3 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0013 YP_833660 116688037 Protein 19024 19350 hypothetical protein TTGACCGATCGTCTTCGCCGGGTTCGACTACGCTCACCCGTTGAATGCACCGGATTTCGAGTGGCTTCGAGTCAACGATATCCACAAGGCATTCGACGTCCGGACGTCGCCACCGATTCGTTCGCTGCCCTCTTTCATGGTCGGCAAAGCCTTGCCGGGCAACGCATTCAGGCCGACGAGCCCATCGAAACCGGGACGCTCACCGCTCGCATGCACAGGGTTTCAACTGGATCGTGCGCCGGTTATCCACACACCGCCGCTTACGCTTCGGGTCACTTCGTCCCGACTCTCCCGAGAATCTCGCCGGTTTCCGGCGCGATGACGTAG MTDRLRRVRLRSPVECTGFRVASSQRYPQGIRRPDVATDSFAALFHGRQSLAGQRIQADEPIETGTLTARMHRVSTGSCAGYPHTAAYASGHFVPTLPRISPVSGAMT KEGG: bcn:Bcen_0058 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0014 YP_833661 116688038 Protein 19613 19296 hypothetical protein ATGAGTACGTTGAATTTCGGCACGGTCGACCAGTGTTCGGTCACGCTCAACACAGCGACGCTGCTGGGCCTGAAGGCTGCCTACGAAGACTTTGCGGCGACCGGGCAGGATCTGCATAACTTCGAGATCTGCATCACGGATAAAAGGGCATCCACGGTGGACCCCATGCCGGATGATGATGTCGTCACCATCACGTTCGTGGCAAAGCTGATTCCGGGCATGCGCGGACTGGGCAACGCGAACCGACTCGGGAAGTCGATCCACTACGTCATCGCGCCGGAAACCGGCGAGATTCTCGGGAGAGTCGGGACGAAGTGA MSTLNFGTVDQCSVTLNTATLLGLKAAYEDFAATGQDLHNFEICITDKRASTVDPMPDDDVVTITFVAKLIPGMRGLGNANRLGKSIHYVIAPETGEILGRVGTK KEGG: bcn:Bcen_0057 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0015 YP_833662 116688039 Protein 20053 19796 hypothetical protein ATGACGTACACGGTCCTGATGGTGTCGCGCGGCGAAATCGTGCTGTCCGACGGAAAGCGGACCGTGCGGGCGCCTGGCGAGGCATTGTCGTCCGGCGTGGACAACGGTCCCGCATTCGTCGTCTATGTCGATTCGATGAAGTACGTCGAGCCCCAAGGCGATGGCGAGACGATCGATAACGCCACTCGCGAGGCGGTGATCTCGGCGATCACCGACTATTTTTTGTCGCGACGTACAACGGTTGATTTCGAATCCTGA MTYTVLMVSRGEIVLSDGKRTVRAPGEALSSGVDNGPAFVVYVDSMKYVEPQGDGETIDNATREAVISAITDYFLSRRTTVDFES KEGG: bcn:Bcen_0056 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0016 YP_833663 116688040 Protein 20401 20072 hypothetical protein ATGAAGGCACCTGTCAATGAGATGCTGGTGACGGATATCGCAGGCCGCGTTGCGGTCGTCGTGACCGAGCTGACAGCTGCCGCCGATGTGCTGAAGCAGTTGGGCTTCGCTCAACAATCCGATCGCTGGGAACGGGCGATCGCAGACGACCATGACCGCCAGGCGCTCGTAGCCGCGCTCATCGATCTCGATGTGTTGTTTTCCGCGGGCCGTGACTGGAGCCCGCAGGCACTCGTCGAGTATTACCGGGAGATCGGTGTCGTTCGAAGTGGTTACCGTTCGGTTGCATGGCGCGGGCCGTCGCAATACGTGGTCGAACGACATGACTGA MKAPVNEMLVTDIAGRVAVVVTELTAAADVLKQLGFAQQSDRWERAIADDHDRQALVAALIDLDVLFSAGRDWSPQALVEYYREIGVVRSGYRSVAWRGPSQYVVERHD KEGG: bcn:Bcen_0055 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0017 YP_833664 116688041 Protein 20693 20433 hypothetical protein ATGACAAATGCTTCATCGCCCCGTCTCCAGGCACTCGATATCGATACGGTCGTACGCAGGATGCAGCACCATCGAGGCGACATCGTGTTCGAGCAACGCGTGTTGATACCGGAGGCCGAGGTCCTGTGTTGCCGCTACGAGGGCGAGCGATTCAACGTGAAGTTCGATCTCGACTACGGCATGTTTGTCGAGCGTGTTGGCATGCTGTCCGCCGAGGACGTCGCGAAGATCGTTGGATGGCTCACGAAGGAGGCAGGGTGA MTNASSPRLQALDIDTVVRRMQHHRGDIVFEQRVLIPEAEVLCCRYEGERFNVKFDLDYGMFVERVGMLSAEDVAKIVGWLTKEAG KEGG: bcn:Bcen_0054 hypothetical protein ; Cytoplasmic Class 3 NC_008542 Chromosome1 Bcen2424_0018 YP_833665 116688042 Protein 21686 22201 hypothetical protein ATGTCCGAGGTCACGACCGCCGCATCGTCCGCGAGCAACGACGAAATCGCCGCTTACGTCGGCAAGAACGCCGCCTGGTTCGAACGAAAATGGGCGATCGCCGACTCGCGCAAGAGCCGGCAGTCGTGGAACTGGGCCGCGTGCTTTCTCGGCCCGGTCTGGTTGGCGTATCGATGCATGTACTGGCAGGCGGCCGCCGTGCTCGCCGTCACGCTCGGCATCACGCTGATCGAATTGCTGTACTTCCCGGGATACTTCGAATCGAGCGTGCTCGACCCGGCCACGATCGCGATCGCGGTGTCGCTCGGCTGGTACGGGAACGGCCTCTACAAGCGGCACGTCGAGCGCCAGATCGGAAAACTGCGCCCGAACGCGACGTCCCGCGAATCGTTTCTCGCGCTGCTCGAGGCGCAAGGCGGCACGAACTGGCTGGCGGCGGCCGGTTTCGCCGTCGCGACGCCGCTGCTCGGCGTCCTGCTGTTCATGATGGGCAACGCCGGAGGCGCGATGTACTGA MSEVTTAASSASNDEIAAYVGKNAAWFERKWAIADSRKSRQSWNWAACFLGPVWLAYRCMYWQAAAVLAVTLGITLIELLYFPGYFESSVLDPATIAIAVSLGWYGNGLYKRHVERQIGKLRPNATSRESFLALLEAQGGTNWLAAAGFAVATPLLGVLLFMMGNAGGAMY KEGG: bcn:Bcen_0052 hypothetical protein ; Cytoplasmic Membrane Class 3 NC_008542 Chromosome1 Bcen2424_0019 YP_833666 116688043 Protein 23185 22304 RNA polymerase, sigma-24 subunit, ECF subfamily ATGCCGAACCTCGACCCGGCCAGCCGCCGCGCCGAAGAACAAGCCGACGCGGCGGCGAGCTTCGATCCGCTGCGTCGCACGCTGATCCGCGTCGCGTACCGGATGCTCGGTTCCGTCGCGGATGCCGAGGACATGGTGCAGGAGGCGTTCATCCGCTGGATGGACGTCGACCGTACCGAGATACGCGTGCCCGAGGCGTTCCTGCGCCGCATGGTGATGCGCATGTGCCTCGACCAGCTGAAATCCGCGCGGCACCAGCGCGAGACCTATATCGGCCCGTGGCTGCCCGAGCCGGTCGTCGAGGAAGACGAACCGGACGACGTCACGCTGCCGCTGCTGCTCGCGCTCGAACGGCTCTCGCCGCTCGAACGCGCGGCGTTCCTGCTGCACGACGTGTTCGGCCTCGAATTCGACGAAGTCGCCACGACGATCCAGCGCGACCCGGCCGCGTGCCGGCAGCTCGCCGCACGAGCCCGCACGCACGTGCGCGACGCGCGACCGCGTTTTCATGTCGAGAAGCAGCGCGGGATCGAACTGGCCGAAGCGTTTTTCGCGGCGTCACGCAGCGGCGACATGCGCGCACTCGGCGCGATGCTCGCCGAGGACGTGAGCCTGCATTCCGACGGCGGCGGCAAGCGCACGGCGGCCGGCAAGCCGGTATTCGGCTTCGAGCTTGTGATGCGGGTGCATGCGTACCTGGCCGAGCTGTTCGCGACGCATGCGTCGAAGCTCGTGCGGGCCGGGTTCATCAACGGGCTGCCGGGTTTCATCACGCTCGAAGCCGACGGCGAGCTGCAGACGACTGCGCTCGAGATCGACGACGGCAAGATCGTCGCGATCTATGTCGTGCGGAATCCTGACAAATTGAAGCATCTGCATTGA MPNLDPASRRAEEQADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEIRVPEAFLRRMVMRMCLDQLKSARHQRETYIGPWLPEPVVEEDEPDDVTLPLLLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTHVRDARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMRVHAYLAELFATHASKLVRAGFINGLPGFITLEADGELQTTALEIDDGKIVAIYVVRNPDKLKHLH PFAM: sigma-70 region 2 domain protein ; Cytoplasmic Class 3 PF04542 Sigma70_r2, Sigma-70 region 2. Region 2 of sigma-70 is the most conserved region of the entire protein. All members of this class of sigma-factor contain region 2. The high conservation is due to region 2 containing both the -10 promoter recognition helix and the primary core RNA polymerase binding determinant. The core binding helix, interacts with the clamp domain of the largest polymerase subunit, beta prime. The aromatic residues of the recognition helix, found at the C-terminus of this domain are though to mediate strand separation, thereby allowing transcription initiation. . COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0020 YP_833667 116688044 Protein 23661 23185 alkylhydroperoxidase like protein, AhpD family ATGACTGCGAAACTCAATCCGTTTGCCGCCGCCCCCGCGCTGATGAAGAGCTGGATGACCGTGTCGGTCGCCGCGGCCGGGAGCCTCGAGCCGACGCTGATCGAGCTGGTCAAGATCCGCGCGTCGCAGATCAACGCGTGCGCGAACTGCCTTAACATGCACACCGTCGAGGCGCGCGAGCAAGGCGAAACCGAGCAGCGCATCTACCTGCTGTCCGCGTGGCGCGAAGCGCCCTGCTACACCGACCGCGAACGCGCGGCGCTCGGCTGGACCGAGGCGCTCACGCGGCTGTCGGAGGGCCATGCGGCGCACGAAGCGGCCTACGCGGCGCTGAACGACCATTTCAGCGAGGAAGAACAGGTGAAACTCACGGTAATGATCAACGTGATCAACGGCTGGAACCGGCTCGCCGTCGGCTTCGGGCTGTGGGTCGACCCGGCCGACGCGAAGGCCGCCGCCGCGAAGATGGTGGCTTGA MTAKLNPFAAAPALMKSWMTVSVAAAGSLEPTLIELVKIRASQINACANCLNMHTVEAREQGETEQRIYLLSAWREAPCYTDRERAALGWTEALTRLSEGHAAHEAAYAALNDHFSEEEQVKLTVMINVINGWNRLAVGFGLWVDPADAKAAAAKMVA TIGRFAM: alkylhydroperoxidase like protein, AhpD familyPFAM: Carboxymuconolactone decarboxylaseKEGG: bcn:Bcen_0050 alkylhydroperoxidase AhpD core ; Unknown Class 3 TIGR00778 ahpD_dom alkylhydroperoxidase AhpD family core domain domain 1.4e-15 Unknown function General PF02627 CMD, Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain. . COG2128 COG2128, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008542 Chromosome1 Bcen2424_0021 YP_833668 116688045 Protein 24004 24237 hypothetical protein ATGCTTTCATTTTTCTTTCACATTCGTTTCACTGGAAATCCGATTCGCGACGTTCACATTTCTGGACCATACTGTTCTGCACGGGCAGATGAAGTGACGCCGCATCCGCGGCCCGGCGCGCGCGCCGGCTGCCCCACGACGCAGCAGCAAATCGCACGTCAGCCGCGCGCACTCGAGCGCAAGGCTTTCCCTTTTCCGGCAACGCAACGCAGCGAATCGCGACGTGAACGGTAA MLSFFFHIRFTGNPIRDVHISGPYCSARADEVTPHPRPGARAGCPTTQQQIARQPRALERKAFPFPATQRSESRRER KEGG: bcn:Bcen_0049 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0022 YP_833669 116688046 Protein 24242 25468 protein of unknown function DUF323 ATGAGCCTCCTTGCATCCCAGCTTCAGCGCCGTTACCAGGACGTGCGCGCCCATAGCATCGCGTTGACCGCGACGCTGTCCGCCGAAGACCAGGCCGTGCAGTCGATGCCCGACGCGAGTCCGACCAAATGGCATCTCGCGCATACGACCTGGTTCTTCGAAACCGTCGTGCTGATGCGCCGCGTGCCGGGCTACGCGCCGTTCGACGCCGCGTTCCAGTTCCTCTTTAATTCCTATTACGAAGCGCTCGGCCCGCGCCATCCGCGGCCGCAGCGCGGGCTGCTCACGCGTCCGTCGCTCGACGAGGTGCATGCGTACCGGCAGTACGTCGACGACGCGATGCTGCGCGCGCTGGCCGGCGCCGACGCGGCACTGCTCGACGCGATCGCGCCCGAGCTCGTGCTCGGCCTGCATCACGAGCAGCAGCACCAGGAGCTGATCGTCACCGACATGCTGCATGCGTTCTCGTGCAACCCGCTGCGGCCGGCATTCCGGCCGCGCACCGGCGACGAAGCCGGATGCGCGCTCGCCGCGGGCGACGCCGGCCCGTTGCGCTGGCTGCCGCAGCCGGGCGGGCTCGTCGAGATCGGCCACGATGGCGATGCGTTTTCGTTCGACAACGAACGGCCCCGTCACACCGCGCTCGTGCGGCCGTACGAGATCGCGAACCGCCTGGTGACGAACGCGGAATTCGCGGCGTTCATCGCCGACGGCGGCTATACGCGGCCCGAGTTCTGGCTGTCCGACGGCTGGGCCACGGTGCAGCGGGAAGGGTGGCAAGGGCCCGCGTACTGGATGCCGGACGACGACGATGCGGCCGCCACGCGCGTGCGACGCACGTTCGGCCTGCATGGCGTCGAGCCGCTCGCGCCCGACGCGCCGGTGTGCCACGTGAGCTTCTACGAAGCGGCCGCGTACGCGGAATGGGCCGGCGCGCGGCTGCCGACCGAATTCGAATGGGAAACCGCGTTCGCGGCCGACGGCATCCGCCAGATGCTGGGGCACGTGTGGCAGTGGACGCGTTCGTCCTACGAGCCGTATCCGGGCTTTCGGCCACTCGCCGGGGTAGCGGCCGAATACAACGGCAAGTTCATGGTCGGCCAGCAGGTCCTGCGCGGCAGCAGCATCGCGACGCCGCCCGGACACGAACGGCCGACGTACCGCAATTTCTTTCCGCCGGCGGCACGCTGGCAATTCACGGGAGTGCGACTTGCGCGAGACGTCTGA MSLLASQLQRRYQDVRAHSIALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYYEALGPRHPRPQRGLLTRPSLDEVHAYRQYVDDAMLRALAGADAALLDAIAPELVLGLHHEQQHQELIVTDMLHAFSCNPLRPAFRPRTGDEAGCALAAGDAGPLRWLPQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFIADGGYTRPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYAEWAGARLPTEFEWETAFAADGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGVRLARDV PFAM: protein of unknown function DUF323KEGG: bcn:Bcen_0048 protein of unknown function DUF323 ; Unknown Class 3 PF03781 DUF323, Domain of unknown function (DUF323). This presumed domain is found in bacterial proteins. In some cases these proteins also contain a protein kinase domain. The function of this domain is unknown.. COG1262 COG1262, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008542 Chromosome1 Bcen2424_0023 YP_833670 116688047 Protein 25452 26465 hypothetical protein TTGCGCGAGACGTCTGACCTGACGGCCACGAGCGGTGGCCTGCAACCCGCCCGCGATTCGCGGCCGAGCGCGTTCGAGCGCGACCTGATCGACGGACTGTCGCGCACGCCGCGCAGCATTCCGCCGAAATACTTCTACGATGCGGCCGGCTCCGCGCTGTTCGACCGCATCTGCGAACTGCCCGAGTACTACCCGACGCGCACCGAGCTCGGCATCCTGCGCGATCGCGCGGCGGAGATCGTGCGGCGGGTCGGCCCGCATGCGGACATCGTCGAATTCGGTGCGGGCTCGCTCGAGAAGATCCGCGTGCTGCTCGACGCATTCGCGAACAATTACGCGAACGCACCGGCGCGCTACGTGCCGGTCGACATCTCCGCCGATTACCTGCACGGCGCGGCCGCGCGGCTGCGGGCGGCCTATCCGTGGCTCGACGTCGCGCCGCTCGCGGCCGACTACACGAAGGCCGAGCAACTGGCCGCGCTGACCGAGACGCCGCGGCGGCGCATCGGCTTTTTTCCCGGCTCGACGATCGGCAACTTCTCGCCGACAGAAGCCGACACGTTCCTGCGCGACGCGGCGCGGCTGCTGCGCGGCGGCGGCCTGCTGGTCGGCGCGGATCTCGTGAAGGACGAGCGCACGCTGCATCACGCGTACAACGACGCGCAGGGCGTGACCGCGCAGTTCAACCTGAACCTGCTGGTGCGCGCGAACGCGGAGTTCGGCGCGGACTTCGACGTCGATGCGTTCTCGCATTGCGCGTTCTACGATCGCGGGCGGCAGCGCATCGAGATGCATCTCGTCAGCGATGTCGCGCAAACCGTGCACGTGCGCGGCCACGTGTTCCGTTTCGAAGCCGGCGAACGCATCCATACGGAGAATTCGCACAAGTTCACGATCGACGGCTTTCATGCGATGGCGCGCCGCGCCGGGTTCGAACCCGATACCGTGTGGACCGACGCGGACAACCTGTTCAGCGTCCACTGGCTGCGCAGCGTCGACGATATCCGCGCGTAA MRETSDLTATSGGLQPARDSRPSAFERDLIDGLSRTPRSIPPKYFYDAAGSALFDRICELPEYYPTRTELGILRDRAAEIVRRVGPHADIVEFGAGSLEKIRVLLDAFANNYANAPARYVPVDISADYLHGAAARLRAAYPWLDVAPLAADYTKAEQLAALTETPRRRIGFFPGSTIGNFSPTEADTFLRDAARLLRGGGLLVGADLVKDERTLHHAYNDAQGVTAQFNLNLLVRANAEFGADFDVDAFSHCAFYDRGRQRIEMHLVSDVAQTVHVRGHVFRFEAGERIHTENSHKFTIDGFHAMARRAGFEPDTVWTDADNLFSVHWLRSVDDIRA KEGG: bcn:Bcen_0047 hypothetical protein ; Unknown Class 3 COG4301 COG4301, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008542 Chromosome1 Bcen2424_0024 YP_833671 116688048 Protein 26759 27061 hypothetical protein ATGAGCAAGAAACTTATTCTCGGTGCAGTTCTCGGTGTAGCGGCGCTGGCAGCCTCGGGCGTCGCGTCGGCCCACGTCGACCTGTCGGTCGGCATCGGCGTGCCGGGCGTCTACACGGCGCCGGCGCCCGTCTACGTCGCGCCGCCTCCGCCGGTGATGTACGCGCCGGTCGGCTATCGCGATGACGACTGGCGTGCACGTCAGTGGCGTGAACACGAGTGGCGCCGCCGTGAATGGCGCGAGCACGAGTGGCGCGAGCGCGCCTGGCGTGACGGCGGCGGCTGGCGCGGCCGTTGGGACTGA MSKKLILGAVLGVAALAASGVASAHVDLSVGIGVPGVYTAPAPVYVAPPPPVMYAPVGYRDDDWRARQWREHEWRRREWREHEWRERAWRDGGGWRGRWD KEGG: bcn:Bcen_0046 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0025 YP_833672 116688049 Protein 27114 27326 hypothetical protein ATGAATCCCATCCGGCACATCGGACGGTATGCCGCCGCCGCAGTCGTTGCGCTCGCAACGATCGGCAGCGCGCACGCGGCGGGCTGCATGAAGGGCGCGGTGGTCGGCGCGGTCGGTGGCTGTATCGTCGGCCATCACATGGCGAAGAAGCAGGCGCAAGAGCAGGCCGCGCAGCACAAGGCCGCCGCGCAGGGCATGCAGGCGGCGCAGTAA MNPIRHIGRYAAAAVVALATIGSAHAAGCMKGAVVGAVGGCIVGHHMAKKQAQEQAAQHKAAAQGMQAAQ KEGG: bcn:Bcen_0045 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0026 YP_833673 116688050 Protein 27514 27870 hypothetical protein ATGAAACAGCAACGATATCTGTCCGTCCTGACGGCCGCGCTGCTCGCGCTCGGCTCGGTGTCCGCCTTTGCGGCGGCCGGCGGCAACGGCGGCGGTCATGGCGCAGGCGGCTCGGGCGGCAACGCGGGCGGGATGTCCGGCGGCCACATGAGCGGCCAGGCGCTGAGCAACTCGAACGGCATGCACGCGGCCGATCGCGACAAGGGCCTCGCGCGCGCGGCCGACCGTTCCGATATGATCGCCGACCGCGCCGGCACGCAGCCGGGCCGGGATCACACGCACGCGCATGGCCATACCGCCCATGCGTCGACGTCCACGCATCATTCGCATCGCAACGCATTCGGCCGCACGCTGTAA MKQQRYLSVLTAALLALGSVSAFAAAGGNGGGHGAGGSGGNAGGMSGGHMSGQALSNSNGMHAADRDKGLARAADRSDMIADRAGTQPGRDHTHAHGHTAHASTSTHHSHRNAFGRTL KEGG: bcn:Bcen_0044 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0027 YP_833674 116688051 Protein 31162 28136 type III restriction enzyme, res subunit ATGCGGCTGCATTTCGAAGCGGATCTCGACTACCAGCGCGAGGCGATCGACGCCGTCTGCGACCTGTTTCGCGGGCAGGAATCGTATCGCGGCGACTTCAGCGTGCTCGCGAACGCCGCGCCCGGCACGACGGCCGCCGCGCAAGGCTCGCTCGGCTTCGCGGTATCGGAGCAAGGCGTCGGCAACCGGCTGTCGCTGACCGACGACGCGCTCGCGCGCAATCTCGCCGACGTGCAGTTGCGCGGCGGGCTGCCGCCGTCCGGCCTGCCCGGCTCGCGCGACTTCACCGTCGAGATGGAGACCGGCACCGGCAAGACCTACGTGTACCTGCGCACGATCTTCGAGCTGAACCGCCGCTACGGCTTCACGAAATTCGTGATCGTCGTGCCGTCGATCGCGATCAAGGAAGGCGTGCACAAGACGCTCGCGATCACCGAGGATCACTTCCGCGCGCTGTACGCGGGCGTGCCGTACGACTACTTCCTGTACGACTCCGCGAAGCTCGGCCAGGTGCGTCACTTCGCGGCGAGCGCGGCAATCCAGATCATGGTGATGACGGTCGCCGCGATCAACAAGAAAGAGATCAACAACCTCTACAAGGACAGCGAGAAGACCGGCGGCGAGAAGCCCATCGACCTGATCCGCGCGACGCGGCCGATCGTGATCGTCGACGAGCCGCAAAGCGTCGACGGCGGCCTCGAAGGGCGCGGGCGCGAAGCGCTCGCCGCGATGGCGCCGCTCTGCACGCTGCGCTATTCGGCCACGCACGTCGACCGCCATCACATGGTGTACCGGCTCGATGCGGTCGACGCGTACGAGCGCAAGCTCGTCAAGCAGATCGAGATCGCGTCGGCGATCGTCGAGGATGCGCACAACAAGCCGTACGTGCGGCTCGTCGGCGTGTCGAACCGGCGCGGCGCGATCAGCGCGCGCGTCGAGCTCGACGTCGCGACGGCGGCCGGCGTGAAGCGCCAGATCGTGTCGGCGACCGACGGCGACGATCTCGAACGCCTGACCAAGCGCGCGCTGTACGCGGGGCTGCGGATCGGCGAAGTGCATGCGGTCAAGGGCGCCGAATACGTGGAGCTGCGCCATCCGGAAGGCGAGGCGTTCCTGTCGCTCGGCGAGGCGTTCGGCGACATCGACACGCTGGCCGTACAGCGCGAGATGATCCGCCGCACGATCCGCGAGCATCTCGACAAGGAGCTGCGCCTCGCCGAGCGCGGCGTGAAGGTGTTGTCGTTGTTCTTCGTCGACTCGGTCGAACGCTATCGCCGCTATGACGAGAACGGCATGCCGGTGAAGGGCGACTACGCGCTGATCTTCGAAGAGGAATATGCGCGCGCGGCGCGCGTGCCGGCCTACCGTGCGCTGTTCGACGGCGTCGACGTCGCGCTGGAAGTCGAGCGTGCGCACAACGGCTACTTCTCGATCGACCGCAAGGGCGGCTGGACCGACACGAGCGAAAGCAGCGCGGCGGCCCGGGAGAACGCGGAGCGTGCTTACGGCCTCATCATGCGCGAGAAGGAAGCGCTGCTGTCGTTCGACACGCCGCTGAAGTTCATCTTCTCGCACTCGGCGCTGAAGGAAGGCTGGGACAACCCGAACGTGTTCCAGATCTGCACGCTGCGCGACATCCAGACCGAACGCGAGCGCCGCCAGACGCTCGGCCGCGGGCTGCGCCTCGCGGTCGACCAGGACGGCGAACGCGTGCGCGACGCGGGCGTGAACACGCTCACCGTGATCGCGACCGAGCGCTACGAGTCGTTCGCCGAGAACCTGCAGAAGGAAATCGAGGCCGATACGGGCATTCGTTTCGGGATCGTCGAGGAACACCAGTTCGCGGCGCTGCCGGTGCAGGAAGACGGCGGTCCCGCGCATGCGCTCGGCATCGAGCTGTCGCGCGTGCTGTGGAACCATCTGCACGAGCAGGGCTACGTCGACGCGCAGGGCAAGGTGCTCGACCGGCTGAAGGATGCGCTGCGCCGGAGCGCGCTCGTGCTGCCGGACGCGTTCGAGCCGCTGCGCGCGCCGATCGTCGCGACGCTGCGCAAGCTGTCGGGCCGCTTCGCGGTGCGCAATGCCGACGAGCGCCGCGCGATCGCGTTGCGGCGCGATGCATCGGGCAAGGCCGTCGTGTTCGGCGAGGATTTCCGCGCGTTGTGGGACCGCATCCGTCATCGCACCGTGTACCGCGTCGAGTTCGACAACGCGAAGCTGGTGCGCGACTGCACGGCCGCGTTGCGCGACGCGCCGGACATCGCACGGGCGCGGCTGCAGTGGCGCAAGGCCGAGATCGACATCGGCAAGGCCGGCATCGAGGCGATCGAGGTGGCCGGCGCCGGCACGGTGCTGCTCGACGAAGGCGAGTTGCCGCTGCCCGACCTGCTCACCGAGCTGCAGGACCGCACGCAGCTCACGCGCCGTTCGCTTGCGACGATCCTCGCCGACAGCGGCCGGCTCGACGATTTCCGCGTGAATCCGCAGCAGTTCATCGCGGTCGCGGCCGATGCGATCAACCGCTGCAAGCGGCTCGCGCTCGTCGCGGGCATCGCGTACCGCAAGCTCGGCGAGCGCCACGTGCATGCGCTCGAATCGTTCGAGAGCGAAGCGCTGACCGGCTACCTGCGCAACCTGCGGCCGGACGCGCGCAAGTCGATCCACGAAGCGGTCGTGTGCGAGACGGACGCCGAGCGCGCGTTCGCCGATGCGCTCGAAGCGCACGACGGCGTGAAGCTGTACGCGAAGCTGCCGGCGTGGTTCCGCGTGCAGACGCCGCTCGGCAGCTATCACCCCGACTGGGCCGTGCTCGCGGAACAGGACGGCGGCGAGCGGCTGTACTTCGTCGTCGATACGCCGAATGCCGATGGCCACGTGCCGAGCGAGCACGAACGCGCGAAGCTCGCGTGCGGCGAAGCGCATTTCCGCGCGCTGGTCGATGGCGACGGCGCGGCGCGCTTCGTGCGGGTCACGCAGGCCGATGCGTTGTTCGAGCCTGCGGCGCCGACGGCGGGCGCGGGGCGCTGA MRLHFEADLDYQREAIDAVCDLFRGQESYRGDFSVLANAAPGTTAAAQGSLGFAVSEQGVGNRLSLTDDALARNLADVQLRGGLPPSGLPGSRDFTVEMETGTGKTYVYLRTIFELNRRYGFTKFVIVVPSIAIKEGVHKTLAITEDHFRALYAGVPYDYFLYDSAKLGQVRHFAASAAIQIMVMTVAAINKKEINNLYKDSEKTGGEKPIDLIRATRPIVIVDEPQSVDGGLEGRGREALAAMAPLCTLRYSATHVDRHHMVYRLDAVDAYERKLVKQIEIASAIVEDAHNKPYVRLVGVSNRRGAISARVELDVATAAGVKRQIVSATDGDDLERLTKRALYAGLRIGEVHAVKGAEYVELRHPEGEAFLSLGEAFGDIDTLAVQREMIRRTIREHLDKELRLAERGVKVLSLFFVDSVERYRRYDENGMPVKGDYALIFEEEYARAARVPAYRALFDGVDVALEVERAHNGYFSIDRKGGWTDTSESSAAARENAERAYGLIMREKEALLSFDTPLKFIFSHSALKEGWDNPNVFQICTLRDIQTERERRQTLGRGLRLAVDQDGERVRDAGVNTLTVIATERYESFAENLQKEIEADTGIRFGIVEEHQFAALPVQEDGGPAHALGIELSRVLWNHLHEQGYVDAQGKVLDRLKDALRRSALVLPDAFEPLRAPIVATLRKLSGRFAVRNADERRAIALRRDASGKAVVFGEDFRALWDRIRHRTVYRVEFDNAKLVRDCTAALRDAPDIARARLQWRKAEIDIGKAGIEAIEVAGAGTVLLDEGELPLPDLLTELQDRTQLTRRSLATILADSGRLDDFRVNPQQFIAVAADAINRCKRLALVAGIAYRKLGERHVHALESFESEALTGYLRNLRPDARKSIHEAVVCETDAERAFADALEAHDGVKLYAKLPAWFRVQTPLGSYHPDWAVLAEQDGGERLYFVVDTPNADGHVPSEHERAKLACGEAHFRALVDGDGAARFVRVTQADALFEPAAPTAGAGR PFAM: type III restriction enzyme, res subunitKEGG: bcn:Bcen_0043 type III restriction enzyme, res subunit ; Cytoplasmic Class 3 PF04851 ResIII, Type III restriction enzyme, res subunit. This family represents the res subunit of type III restriction enzymes (EC:3.1.21.5).. COG3587 COG3587, Restriction endonuclease [Defense mechanisms]. Defense mechanisms NC_008542 Chromosome1 Bcen2424_0028 YP_833675 116688052 Protein 33180 31162 Site-specific DNA-methyltransferase (adenine-specific) ATGGAAAAGACGATGCAGAAACTCGATGCGGCCAGCCCGCAGGCGATGTCGACGGATTTCACCGCCGACAACGTCGCGCGCCTGAAGGCGCTGTTCCCCGAACTCGTGACCGAAGGCCCGGACGGCGCGTCGGTCGACGTCGACGTGCTGAAGGCGCTGGTCGGCGAGCGCACGGTCGGCGACGCCGACGAGCGCTACGGCTTCCACTGGCACGGCAAGCGCGCCGCGCGCCAGGCCGCGCTCACGCCGTCGACGGGCACGCTGCGACCCTGCCCCGACGACAGCGTCGCGTGGGACGACACGCGCCATCTCGTGATCGAGGGCGACAACCTCGACGTGATGAAGCTGCTGCACAAGAGCTACGCCGGCAAGGTGAAGCTCGTCTACATCGACCCGCCGTACAACACCGGCAGCGATTTCGTCTATCCGGACGACTTCAGCGACAGCATCCGCCACTACCTGGCGATGACGGGCCAGACCGAAGCCGGCGTGAAGCGCAGCACCAACACCGAGGCGAACGGCCGGTTCCACACCGACTGGCTGAACATGATGTATCCGCGCCTGAAGCTCGCGCACGCGCTGCTGTCCGACGAAGGGCTGATCGCGGTGCACATCGACGAGCACGAAGTGCACGCGCTCGTGCTGATGCTGCGCGAGATCTTCGGCGAGGAAAACGAGCTCGGCGTGGCCGTGTGGGACAAGCGCAACCCGAAGGGCGACGCGCGCGGCGTCGCGTACCAGCACGAATCGCTGGTGCTGTTCGCGCGCAACGCCGAGACGCTGCTCGAACGGGCGCCGCTCAAGCGCCCGAAGCGCAACGCGCAGCGCATGCTCGATGCCGCGCACGACGCGGTGTACCGCAGCGGCAACCCGAAGGACGCGCAGAAGGCGTACCGCGCGTGGATGAAGGCGCAGACCAACCTGTCCGGCGGCGAGGTGATGTACGACCGGCTGTCGCCGGAAGGCCGCGTGTACCGCCTCGTGTCGATGGCGTGGCCGAACAAGAAGAAGGCGCCGGACGAATATTTCACGCCGCTGATCCACCCGGTCACCGGCAAGCCGTGCGCGATGCCGGCGCGCGGCTGGCGCAACCCGCCCGCGACGATGCAGGCACTGCTCGAGCGCGGCCAGATCGAATTCGGCCCGGATGAAACCACGCAGCCGCAGCGGATCTACTACCTCGACGAGAACATGTACGAGAACGTGCCGTCGGTGCTGCCGTTCGCGGGCTCCGACGACGCGCTGCTGAAGACGCTCGGCATCCCGTTCGACCTGCCGAAGCCGGTCGACTTCGCGGCGGCCGTGATCGGCTGGTGCACGCGCGGCGACGACATCGTGCTCGACTGCTTCGCCGGCTCCGGTTCGACCGGCCACGCGGTGATGCAGGTGAACGCGACCGACGGCGGCGCGCGCCGCTATATCCTCGTGCAGCTGCCCGAGGCGCTCGACCGCCGCGACAAGACGCAAACCGCGGCCGCCGATTTCTGCGCGAAGCTGAAAAAGCCGCTGACGCTCGCGGAAATCACGAAGGAGCGCCTGCGCCGCGCCGCGCAGCAGGTCGCGCGCGACTATCCGGAAAGCTATGGCGACCTCGGCTTTCGCGTATACCGGCTCGACACGACCAACGTGATCGAATGGGACCCGCGCCGCGACGACTTCGATCATGCCCTCTTCGCGTCCGTCGAACACGTGAAGACCGGCCGCACCGAGGACGACCTGCTCGCCGAGCTGACGCTCAAGCTCGGCCTCGACCTGTGCACGCCGGTCGAGCATCACCAGGTGGCCGGCAAGACGGTGCACCTGATCGGCCGCGCGATCGTCGCGTGCTTCGACGCACGCATTTCGCGCGACGACGCGGGCCCGCTCGCCGACGGCATCGTCGACCTGCTCGACGCGAGCGGCGCGTCGCGCGACGTCACGTGCCTGTTCCGCGACAGTGGTTTCGTCGACGACGTCGCGAAGCTCAATCTCGCCGCGCTGCTCGAACAGCACGGCGTGAAGCGCGTGCGGAGCCTGTGA MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPDGASVDVDVLKALVGERTVGDADERYGFHWHGKRAARQAALTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKSYAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQTEAGVKRSTNTEANGRFHTDWLNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGDARGVAYQHESLVLFARNAETLLERAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRAWMKAQTNLSGGEVMYDRLSPEGRVYRLVSMAWPNKKKAPDEYFTPLIHPVTGKPCAMPARGWRNPPATMQALLERGQIEFGPDETTQPQRIYYLDENMYENVPSVLPFAGSDDALLKTLGIPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYILVQLPEALDRRDKTQTAAADFCAKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDTTNVIEWDPRRDDFDHALFASVEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVHLIGRAIVACFDARISRDDAGPLADGIVDLLDASGASRDVTCLFRDSGFVDDVAKLNLAALLEQHGVKRVRSL PFAM: DNA methylase N-4/N-6 domain proteinKEGG: bcn:Bcen_0042 site-specific DNA-methyltransferase (adenine-specific) ; 2.1.1.72 ; Cytoplasmic Class 3 PF01555 N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.. COG2189 COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0029 YP_833676 116688053 Protein 34667 33540 outer membrane protein (porin)-like protein TTGAAACGAAAAACCCTTGCCCTTTCCATCGCGGCGGCAGGCCTGTGCGCCGGCCACGCGCATGCGCAGTCGAGCGTGCAGCTCTACGGCCTGATGGACCTGAGCTTTCCGACCTACCGGACCCACGCCGACGCGAACGGCAAACACGTGATCGGGATGGGCAACGAAGGCGAACCGTGGTTCAGCGGCAGCCGCTGGGGCCTGCGCGGCGCCGAAGACATCGGCGGCGGCACGAAGATCATCTTCCGCCTCGAAAGCGAATTCGTGGTCGCGAACGGCCAGATGGAAGACGAAGGCCAGATCTTCGACCGCGACGCGTGGGTCGGCGTCGAGGACGAGCGCTTCGGCAAGCTGACGGCCGGCTTCCAGAACACGATCGCGCGCGATGCGGCGACGATCTACGGCGACGCGTACGGCTCCGCGAGACTGTCGACCGAGGAAGGCGGCTGGACCAACTCGAACAACTTCAAGCAGATGATCTTCTACGCGGCCGGCCCGACCGGCACGCGCTACAACAACGGCGTCGCGTGGAAGAAGCTGTTCAGCAACGGCATCTTCGCGAGCGCCGGCTACCAGTTCAGCAACTCGACGTCGTTTGCGACCGGCTCCGCGTACCAGGCCGCGCTCGGCTACAACGGCGGGCCGTTCAACGTGTCGGGCTTCTACAACCACGTGAACCACAACGGCTTCCGGAACCAGACGTTCTCGGTCGGCGGCAACTACACGTTCGACATCGTGCGGCTGAATGCCGGCTACTTCCGCTACAACGGTGACCAGGGCCCGCTCGGCCAGCGTCACGACGATTCGTGGACGGTGTCGATGAAGATCGCGCCGAAGGGCGCGCTCGACTACGAGCTCGGCTACCAGCAGATGCGCATCAAGAACGCCGCGAACAACGCGGACGGCTTCACGCCGAACGCGAACCTCGGCGCGTTCAGCCTGACCAACGGCGTCGCCAACGGCTTCAAGGAGACGATCTACGGGTCGGTGTTCTACCACCTGAGCAAGCGCACCGAGGTGTACCTGGCCGGCGACTACATGAAGCTGCACGGCGGCTACACGGTGTCGTCGACGTTCGGCGCGAAGAACCAGCTCGAACTGACGTCGGGCATCCGCACGCGTTTCTGA MKRKTLALSIAAAGLCAGHAHAQSSVQLYGLMDLSFPTYRTHADANGKHVIGMGNEGEPWFSGSRWGLRGAEDIGGGTKIIFRLESEFVVANGQMEDEGQIFDRDAWVGVEDERFGKLTAGFQNTIARDAATIYGDAYGSARLSTEEGGWTNSNNFKQMIFYAAGPTGTRYNNGVAWKKLFSNGIFASAGYQFSNSTSFATGSAYQAALGYNGGPFNVSGFYNHVNHNGFRNQTFSVGGNYTFDIVRLNAGYFRYNGDQGPLGQRHDDSWTVSMKIAPKGALDYELGYQQMRIKNAANNADGFTPNANLGAFSLTNGVANGFKETIYGSVFYHLSKRTEVYLAGDYMKLHGGYTVSSTFGAKNQLELTSGIRTRF KEGG: bcn:Bcen_0041 outer membrane protein (porin)-like ; Outer Membrane Class 3 PF00267 Porin_1, Gram-negative porin.. COG3203 OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]. Cell envelope biogenesis, outer membrane NC_008542 Chromosome1 Bcen2424_0030 YP_833677 116688054 Protein 35627 34950 two component transcriptional regulator, winged helix family ATGAAACTTTTGCTGGTCGAAGACAACGCCGAGCTCGCGCACTGGATCGTGAACCTGCTGCGCGGCGAGGATTTCGCGGTCGACTGCGTCGGCGACGGCGAACGGGCCGACACCGTGCTCAAGACCGAACGCTACGACGCGGTGCTGCTCGACATGCGGCTGCCCGGCATCAGCGGCAAGGAAGTGCTCGCGCGGCTGCGGCGCCGCAACGACAACGTGCCGGTGCTGATGCTGACCGCGCACGGCTCGGTCGACGACAAGGTCGACTGCTTCGGCGCGGGCGCCGACGACTACGTCGTGAAGCCGTTCGAGTCGCGCGAGCTGGTGGCGCGCATCCGCGCGCTGATCCGCCGGCAGGCCGGCGTCGGCACGACGCAGCTCGTGTGCGGCGACCTCGTCTATGCGTTCGGCACGCGTGAATTCCGCTGCGGCGACGCGGTGCTCGCGCTGCGGCGCCGCGAGCATGCGATCCTCGAAACGCTGATGCTGCAGCAGAACAAGACGGTATCGAAGGCGCGGCTGATGGACAGCGTGTTCGCGCTCGACGACGAGCCGAGCGCCGACGCGATCGACATCTACATCCACCGGCTGCGCAAGCATCTCGCCGGCAGCACGGCCGAGATCATCACGCTGCGCGGGCTCGGCTACATCCTGCGGATGAAGAGCGCGCACGGTTGA MKLLLVEDNAELAHWIVNLLRGEDFAVDCVGDGERADTVLKTERYDAVLLDMRLPGISGKEVLARLRRRNDNVPVLMLTAHGSVDDKVDCFGAGADDYVVKPFESRELVARIRALIRRQAGVGTTQLVCGDLVYAFGTREFRCGDAVLALRRREHAILETLMLQQNKTVSKARLMDSVFALDDEPSADAIDIYIHRLRKHLAGSTAEIITLRGLGYILRMKSAHG PFAM: response regulator receiver ; Cytoplasmic Class 3 GO:0006796 ; TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB equivalog 2.7e-20 Signal transduction Two-component systems PF00072 Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.. COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. Signal transduction mechanisms / Transcription NC_008542 Chromosome1 Bcen2424_0031 YP_833678 116688055 Protein 37008 35641 periplasmic sensor signal transduction histidine kinase ATGGCGCACAGCCTGCGCGGGCGGCTCTTGTGGTGGCTGCTGCTGCCGCTCGCGGTGTTCGTGCTGATCGCCGGCGCGATGTCGTACGACACCGCGCGGACCACGGCCGCGCTCGTGCAGGACAGCGCGCTCGTCGCATCCGCGCGCACGATCGGCGAGGACGTCGAATGGCGTAACGGTCGGCCCGCGGCCGACGTGCCGCCCGCCGCGCTGGAGATCTTCGAATCGCCGTCCGGCGACTCGGTGTTCTACAAGGTGATCGACGGCCACGACCGCCTGCTCACCGGCAATCCGGCGCTCGACCTGCCCGCGCGGCACGGCACCGAGCCGACGCTGTACGACACGTCGCTCGACGGCGTGCCGCTGCGCGCGGTGGCCTACGACCGCCAGCTGTACGACGAGGGGCAGGTCGAGACGGTCACGGTGGTCGTCGCGAAAACGACGCGTTCGTACGGCGCGATGGTCGCGACGATCTGGCGGCCGCAACTCGTGCGTCTGTCGCTGATGCTGGTGCTCGCGGTGGTGCTCGTCTATCTCGGCCTCACCTTCGAGCTGCGCCCGCTGATGAAGCTGAAGGACGACGTGGCCGACCGCGGGCCGATGGAGCTGGAGCCGATCCGCCCCGAGCGGCTCCAGCACGAGCTGCGGCCGATCGTCGACGCGATCAACCAGTGCATCGCGCGCCTGAACATGCATACGGCCACGCAGCGCCGCTTCATCGCGGATGCCGCGCACCAGCTGCGCACGCCGATCGCGGTGCTCGATACGCAGATCCAGTACGCGCAGCAGCGCGGCAACGGCGATCACGAACTCGCGTCCGTGCTCGACAGCATGCAGCGCAGCAGCCGCAAGATGGCGGATGTGACCGACAAGCTGCTGCTGCTCGCGCATGCGGAAGCGACGCCGTCGACCTTGCTCACCCACCGCGTCGATCTGGCCACCGTGGTGTCGAGCGTGCTGGAAGAGACGATCGTGCTCGCGCAGCGGCGCGACATCGACCTCGGCGCCGACCTCGGCGAGCGGCTCGACGTCGCGGGCAGCGACAGCCTGCTCACCGCGCTGGTGATGAACCTCGTCGACAACGCGGTGCGCTACACGCAGCCCGGCGGCTGCGTGACGGTCTGCGCGCGGCGCGACGGCGACGCAATCGTGCTCGACGTGGTCGACGACGGCCCCGGCATCCCGGCCGAAGCCCGACCGCACGTATTCAAGCGGTTCTACCGCGTGTCGGCCGATACCGAGGGGTCGGGCCTCGGGCTCGCGATCGTCCGCGAGATCGCGCTGGCGCACGGCGGCAGCGCATCGCTCGCGCCGGGGCCCGGCAATCGCGGTGTCGTCGTGACCGTGCGGCTGCCCGCTTTCGATTGA MAHSLRGRLLWWLLLPLAVFVLIAGAMSYDTARTTAALVQDSALVASARTIGEDVEWRNGRPAADVPPAALEIFESPSGDSVFYKVIDGHDRLLTGNPALDLPARHGTEPTLYDTSLDGVPLRAVAYDRQLYDEGQVETVTVVVAKTTRSYGAMVATIWRPQLVRLSLMLVLAVVLVYLGLTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNMHTATQRRFIADAAHQLRTPIAVLDTQIQYAQQRGNGDHELASVLDSMQRSSRKMADVTDKLLLLAHAEATPSTLLTHRVDLATVVSSVLEETIVLAQRRDIDLGADLGERLDVAGSDSLLTALVMNLVDNAVRYTQPGGCVTVCARRDGDAIVLDVVDDGPGIPAEARPHVFKRFYRVSADTEGSGLGLAIVREIALAHGGSASLAPGPGNRGVVVTVRLPAFD PFAM: ATP-binding region, ATPase domain protein domain protein ; Cytoplasmic Membrane Class 3 TIGR01386 cztS_silS_copS heavy metal sensor kinase No data 3.5e-16 No data No data PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.. COG0642 BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. Signal transduction mechanisms NC_008542 Chromosome1 Bcen2424_0032 YP_833679 116688056 Protein 37954 37097 binding-protein-dependent transport systems inner membrane component ATGACCGACATGACGCTTCCCCCCACCGCCCTTCCGGCGACGACGCTCGAGGACGAGTCGCGCGCCGCTCAAACCCGGCTGCGCCGCCGCCGGCAACTGATCATCGGCCTGCGGATCGCCGTGCTCGTCGTCGTGCTCGGCGGCTGGGAACTCGCCGCACGGCTGAAGTGGATCGACCCGTTCTTCTTCTCGATGCCATCGCTGATCTTCGAGCAGATCCAGGACTGGTTCGTGAACGGCACGTCGCAAGGCCCGCTGCTCACGCAGGTATGGGTCACGCTCGAGGAAACCACGATCGGCTTCCTGATCGGCTCGGTGGCCGGCGTGATCTGCGGGATCGTGCTCGGCCGCAACAAGCTGATGGCCGACGTGTTCGGCCTGTACATCCAGATCGCGAACTCGATCCCGCGCGTCGTGCTCGGCTCGGTGTTCGTGATCGCGCTCGGCCTCGGGATGGCGTCGAAGATCGCGCTGGCCGTCGTGATGGTGTTCTTCGTCGTGTTCGGCAACGCGTTCCAGGGCGTGCGCGAAGCGGATCGTTACCTGATCGCGAACGCGCAGATCCTCGGTGCGTCGCGCCGGCAGATCACCACGTCGGTCGTGATCCCGTCCGCGCTCTCGTGGATTCTCGCGAGCCTGCACGTGAGCTTCGGCTTCGCGCTGGTCGGCGCGGTGGTCGGCGAATTCCTGGGTTCCAAGCAAGGGATCGGGCTGCTAATCTCCACCGCCCAGGGCGCGTTCAACGCGAGCGGCGTGTTCGCGGCGATGATCGTGCTGGCCGTGGTCGCGCTGGCCGCCGACTACCTGCTGACGCGGATCGAGAAGCGGCTGCTGAAGTGGCGTCCCGCGGCGTTCTGA MTDMTLPPTALPATTLEDESRAAQTRLRRRRQLIIGLRIAVLVVVLGGWELAARLKWIDPFFFSMPSLIFEQIQDWFVNGTSQGPLLTQVWVTLEETTIGFLIGSVAGVICGIVLGRNKLMADVFGLYIQIANSIPRVVLGSVFVIALGLGMASKIALAVVMVFFVVFGNAFQGVREADRYLIANAQILGASRRQITTSVVIPSALSWILASLHVSFGFALVGAVVGEFLGSKQGIGLLISTAQGAFNASGVFAAMIVLAVVALAADYLLTRIEKRLLKWRPAAF PFAM: binding-protein-dependent transport systems inner membrane componentKEGG: bcn:Bcen_0038 binding-protein-dependent transport systems inner membrane component ; Cytoplasmic Membrane Class 3 GO:0043192 ; TIGR01183 ntrB nitrate ABC transporter, permease protein equivalog 2.3e-10 Transport and binding proteins Anions PF00528 BPD_transp_1, Binding-protein-dependent transport system inner membrane component. The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.. COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008542 Chromosome1 Bcen2424_0033 YP_833680 116688057 Protein 38811 38014 ABC transporter related ATGAACCAGGCAGTTTCCCCGAGCACACCGGCGATCGAGTTTCGCAATGTGTCGTGCCGCTTCATTTCGCCGGAAGGCAAGGCCACCGTCGCGCTGCGCGACTTCAGCATGAGCGTCGCGCGCGGCGAGTTCATCGCGATCGTCGGGCCGACCGGCTGCGGCAAGTCGACCACGCTGAACCTGATCACCGGGCTGCTCAAGCCCGCGTCGGGCGAAGTCCGCGTGATGGGCCGCCCGGTCGACGGCATCGACCCGCGCATCGGTTTCGTGTTCCAGGCGGACGCCGTGTTCCCGTGGCGCAACGTGATCGACAACGTCGCGGCCGGCCCGCTGTTCCGCGGCCGCTCGAAGGACGTCGCGTACGCGCAGGCCGAGGAATGGATCCGCAAGGTCGGCCTCGACAAGTTCACCAAACACTACCCGCACCAGCTCTCCGGCGGGATGAGAAAGCGCGTCGCGCTCGCGCAGACCTTCATCAACCAGCCGGAAATCCTGCTGATGGACGAGCCGTTTTCCGCGCTCGACATGCAGACCCGCACGCTGATGCAGGACGAGCTGCTGCAGCTGTGGTCCGCGAACAAGGGCTCGGTCGTGTTCGTCACGCACGATCTCGAAGAGGCGATCGCGCTTGCCGACCGCGTGTTCGTGCTGACCGCCCGCCCCGCGACGCTCAAGCGCGTCGTCGAGATCGACCTGCCGCGCCCGCGCGTCATGTCGGAAGTGCGCTACGACGCGCGCTTCATCGAAATTTCCAGGGACATCTGGCACGACCTGCGCGAAGAAGTGCAGATCGGCTGA MNQAVSPSTPAIEFRNVSCRFISPEGKATVALRDFSMSVARGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRPVDGIDPRIGFVFQADAVFPWRNVIDNVAAGPLFRGRSKDVAYAQAEEWIRKVGLDKFTKHYPHQLSGGMRKRVALAQTFINQPEILLMDEPFSALDMQTRTLMQDELLQLWSANKGSVVFVTHDLEEAIALADRVFVLTARPATLKRVVEIDLPRPRVMSEVRYDARFIEISRDIWHDLREEVQIG PFAM: ABC transporter relatedSMART: AAA ATPaseKEGG: bcn:Bcen_0037 ABC transporter related ; Unknown (This protein may have multiple localization sites) Class 3 GO:0043192 ; TIGR01184 ntrCD nitrate ABC transporter, ATP-binding proteins C and D subfamily 1.8e-59 Transport and binding proteins Other PF00005 ABC_tran, ABC transporter. ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain pfam00664. These four domains may belong to a single polypeptide, or belong in different polypeptide chains.. COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008542 Chromosome1 Bcen2424_0034 YP_833681 116688058 Protein 39937 38933 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein ATGCGACCCATCCTGCGCACCCTCGCCGTGGCAGCCAGCCTGAGCTGCGCGCTCGCCGCTCACCCCGCTTTCGCCGACGACGGCGGCAAGATCACGATCATGGTCGGCGGGATCGCGAAGCTGATCTACCTGCCCGCGCGGCTCACGCAGGAGCTCGGCAACTTCAAGGCCGAAGGGCTCGACGTCGAGCTGCTGTCGCAGCCGGCCGGCGTCGACGCCGAGAACGAGCTGCTCGCGGGCGCCGTGCAGGGCGTCGTCGGCTTCTACGACCACACGGTCGACCTGCAGAGCAAGGGCAAGGACGTGAAGGCGATCGCCGTGCTCTGCCAGGTGCCGGGCGAAGTCGAGATGGTGTCGACCAAGGCCGCGCCGACCTTCAAGTCGATGGCCGACGCGAAGGGCAAGACGCTCGGCGTGACGGGCCTCGGCTCATCGACGAGCTTCCTCACCCAATACCTCGCGCTGCAGCACGGCGTGCCGTCGACGCAGTACACGATGCTGCCGGTCGGCGCCGACGCGAGCTTCATCGCCGCGATCAAGCAGGGCCGCATCGACGCCGGGATGACGACCGAGCCGACGGTGTCCGCGCTCGAGAAGATGGGCGACGCGAAGGTGCTGGTCGACCTGCGCACGCTGGAAGGCACGCGCGCCGCGCTCGGCGGCACCTACCCGGCAGCGAGCCTGTACGTGCAGTCGGCGTGGGCCGATGCGCACAAGGCGGAAGCGACCAAGCTCGCGCACGCGTTTGCCAAGACGATGCAGTTCATCCACACGCACAGCGCCGAGGAAATCGCCGCGAAGATGCCGGCCGACTACCAGAAGGACAAGGCGCTGTACGTGGCCGCGCTGAAGGCGTCGCTGCCGATGTATACGGCTGACGCGAAGATGCCGGCCGACGGCCCGGCGCTCGTGCTGAAGGTGCTGTCGGCGTTCAACCCGTCGGTGAAGGGCAAGCACATCGACCTGGCGCGCACCTACACGAACGATTTCGTGAACGCGAAGTAA MRPILRTLAVAASLSCALAAHPAFADDGGKITIMVGGIAKLIYLPARLTQELGNFKAEGLDVELLSQPAGVDAENELLAGAVQGVVGFYDHTVDLQSKGKDVKAIAVLCQVPGEVEMVSTKAAPTFKSMADAKGKTLGVTGLGSSTSFLTQYLALQHGVPSTQYTMLPVGADASFIAAIKQGRIDAGMTTEPTVSALEKMGDAKVLVDLRTLEGTRAALGGTYPAASLYVQSAWADAHKAEATKLAHAFAKTMQFIHTHSAEEIAAKMPADYQKDKALYVAALKASLPMYTADAKMPADGPALVLKVLSAFNPSVKGKHIDLARTYTNDFVNAK KEGG: bcn:Bcen_0036 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein ; Unknown Class 3 GO:0043192 ; TIGR01728 SsuA_fam ABC transporter, substrate-binding protein, aliphatic sulfonates family subfamily 2.4e-08 Transport and binding proteins Other COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008542 Chromosome1 Bcen2424_0035 YP_833682 116688059 Protein 40905 40123 flagellar biosynthetic protein FliR ATGTTCTCGGTCACCTACGCGCAGCTCAACGGCTGGCTCACGGCGTTCCTGTGGCCGTTCGTGCGGATGCTCGCGCTGGTCGCGACGGCGCCCATGGTCGGCCACGCGGCCGTGCCGGTGCGCGTGAAGATCGGCGTCGCCGCGTTCATGGCGCTCGTCGTCGCGCCGACGCTCGGCGCGATGCCGGACGTCACCGTATTCTCCGCGCAGGGCATCTGGATCCTCGTCAATCAATTCCTGATCGGCGTCGCGATGGGTTTCACGATGCAGCTCGTGTTCGCGGCCGTCGAAGCGGCCGGCGATTTCATCGGGCTGTCGATGGGGCTCGGCTTCGCGACCTTCTTCGATCCGCATTCGAGCGGCGCGACGCCCGCGATGGGCCGGTTCCTGAACGCGGTCGCGATGCTCGCGTTCCTCGCGGTGGACGGCCACCTGCAGGTGTTTGCGGCGCTCGCCGCGTCGTTCCAGTCGCTGCCGGTGTCGGCCGACCTGCTGCACGCGCCGGGCTGGCGTACGCTCGCCGCGTTCGGCGCGACCGTGTTCGAGATGGGGCTGCTGCTGTCGCTGCCGGTGGTCGTGGCGCTGCTGATCGCGAACCTCGCGCTCGGCATCCTGAACCGCGCGGCGCCGCAGATCGGCATGTACCAGATCGGCTTTCCCGTCACGCTGATCGTCGGGCTGTTGCTCGTGCAACTGATGATCCCGAACCTCGTGCCGTTCGTGTCGCACCTGTTCGACATGGGGCTCGATGCGATGGGGCGGGTGCTGATCGGGTGGCGCTAG MFSVTYAQLNGWLTAFLWPFVRMLALVATAPMVGHAAVPVRVKIGVAAFMALVVAPTLGAMPDVTVFSAQGIWILVNQFLIGVAMGFTMQLVFAAVEAAGDFIGLSMGLGFATFFDPHSSGATPAMGRFLNAVAMLAFLAVDGHLQVFAALAASFQSLPVSADLLHAPGWRTLAAFGATVFEMGLLLSLPVVVALLIANLALGILNRAAPQIGMYQIGFPVTLIVGLLLVQLMIPNLVPFVSHLFDMGLDAMGRVLIGWR TIGRFAM: flagellar biosynthetic protein FliRPFAM: type III secretion system inner membrane R proteinKEGG: bcn:Bcen_0035 flagellar biosynthetic protein FliR ; Cytoplasmic Membrane Class 3 GO:0009296 ; TIGR01400 fliR flagellar biosynthetic protein FliR equivalog 1.9e-79 Cellular processes Chemotaxis and motility PF01311 Bac_export_1, Bacterial export proteins, family 1. This family includes the following members; FliR, MopE, SsaT, YopT, Hrp, HrcT and SpaR All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.. COG1684 FliR, Flagellar biosynthesis pathway, component FliR [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0036 YP_833683 116688060 Protein 41202 40930 flagellar biosynthetic protein FliQ ATGACGCCCGAACAAGTGATGACGCTGGCGCACCAGGCGATGATGGTCGGCCTGCTGCTCGCGGCCCCGCTGCTGCTGGTCGCGCTCGCGGTCGGCCTCGTCGTGAGCCTGTTCCAGGCCGCGACGCAGATCAACGAAGCGACGCTGTCGTTCATCCCGAAGCTGCTCGCGGTCGCCGCGACGCTCGTGATCGCCGGCCCGTGGATGCTGACGACGATGCTCGACTACTTGCGGCAGACGCTGCTGCACGTCGCGACGCTCGGCGCCGGCTGA MTPEQVMTLAHQAMMVGLLLAAPLLLVALAVGLVVSLFQAATQINEATLSFIPKLLAVAATLVIAGPWMLTTMLDYLRQTLLHVATLGAG TIGRFAM: flagellar biosynthetic protein FliQPFAM: export protein FliQ, family 3KEGG: bcn:Bcen_0034 flagellar biosynthetic protein FliQ ; Unknown Class 3 GO:0009296 ; TIGR01402 fliQ flagellar biosynthetic protein FliQ equivalog 2e-36 Cellular processes Chemotaxis and motility PF01313 Bac_export_3, Bacterial export proteins, family 3. This family includes the following members; FliQ, MopD, HrcS, Hrp, YopS and SpaQ All of these members export proteins, that do not possess signal peptides, through the membrane. Although the proteins that these exporters move may be different, the exporters are thought to function in similar ways.. COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0037 YP_833684 116688061 Protein 41981 41220 flagellar biosynthetic protein FliP ATGAAACACGCATTCCTGCGTCACGCGGCGCGCGTCGCGCCCGTGCTGATCCTCTGTCTTGCTCCGGCGCTCGCGTATGCGCAGGCGAACGGCCTGCCCGCGTTCAACGCGAGCCCGGGCCCGCACGGCGGCACCACCTATTCGCTGAGCGTGCAGACGATGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGCATCATCATCGTGCTGTCGCTGCTGCGCCAGGCGCTCGGCACCGCGACGACGCCGCCGAACCAGGTGCTCGTCGGCCTCGCGATGTTCCTCACCTTCTTCGTGATGTCGCCGGTGCTCGACCGCGCGTACAACGACGGCTACAAGCCGTTCTCCGACGGCTCGATGCCGATGGAGCAGGCCGTGCAGCGCGGCGTCGCGCCGTTCAAGACCTTCATGCTGAAGCAGACCCGCGAGACCGATCTCGCGCTGTTCGCGAAGATCTCGAAGGCCGCGCCGATGCAGGGCCCGGAAGACGTGCCGCTGTCGCTGCTGGTGCCCGCGTTCGTCACGAGCGAGCTGAAGACCGGCTTCCAGATCGGCTTCACGGTGTTCATTCCGTTCCTGATCATCGACATGGTCGTCGCGAGCGTGCTGATGTCGATGGGGATGATGATGGTGTCGCCGTCCACCGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGATCGGCTCGCTCGCGCAGAGCTTCAGTTAA MKHAFLRHAARVAPVLILCLAPALAYAQANGLPAFNASPGPHGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVLSLLRQALGTATTPPNQVLVGLAMFLTFFVMSPVLDRAYNDGYKPFSDGSMPMEQAVQRGVAPFKTFMLKQTRETDLALFAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTVFIPFLIIDMVVASVLMSMGMMMVSPSTVSLPFKLMLFVLVDGWQLLIGSLAQSFS TIGRFAM: flagellar biosynthetic protein FliPPFAM: type III secretion system inner membrane P proteinKEGG: bcn:Bcen_0033 flagellar biosynthetic protein FliP ; Cytoplasmic Membrane Class 3 GO:0009296 ; TIGR01103 fliP flagellar biosynthetic protein FliP equivalog 8.1e-135 Cellular processes Chemotaxis and motility PF00813 FliP, FliP family.. COG1338 FliP, Flagellar biosynthesis pathway, component FliP [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0038 YP_833685 116688062 Protein 42599 42018 flagellar biosynthesis protein, FliO ATGAACGTCGTGATGTCCGGCCGGCGCGCGTGCCGCGCGATTGCGGCGGCGGCACTGGCCGCCGCCGCGTCGCTCGTGTGCGCACCGGCCGGCGCCGCCGACATGAACGCGGTCAACCACCCCGGTTCGATCGCGTCGAGCGTGACGGTCGGTTCGGCCGCGCCGTCGCTCGGCATCGGCGCGGTGCTGCAGACGCTCGTCGGGCTCGCGGTCGTGATCGGCCTCGTGTTCGCGTGCGCGTGGCTCGCCCGCCGCTTCGGCTTCCAGCCCGCGCGGCGCGGCGGCCCGCTGAAGGTCGTGTCCAGCGTCGGGCTCGGCGCGAAGGAAAGCGCGACGATCGTCGAGATCGGCGACACCTGGCTCGTGCTCGGCGTCGCGCCGGGCAACGTGCGATTGCTGCATACGCTGCCGGCCGGTTCGGCGGCGGCCACCGCGACGGCGACTGCGGGTTCGGCCCCGGCCGACGCGTCCGTCGGCGGCACTTCGTCCGACGCCGGCCTGCCCGGCACGTTCGGCTCGCGGTTTCGCGACGCGCTCGCGGGCGAAGCCGCGAAACGCCTCGGGCGCGGCAAGGACCGCTGA MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIGAVLQTLVGLAVVIGLVFACAWLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTWLVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGGTSSDAGLPGTFGSRFRDALAGEAAKRLGRGKDR PFAM: flagellar biosynthesis protein, FliOKEGG: bcn:Bcen_0032 flagellar biosynthesis protein, FliO ; Unknown Class 3 PF04347 FliO, Flagellar biosynthesis protein, FliO. FliO is an essential component of the flagellum-specific protein export apparatus. It is an integral membrane protein. Its precise molecular function is unknown.. COG3190 FliO, Flagellar biogenesis protein [Cell motility and secretion]. Cell motility and secretion NC_008542 Chromosome1 Bcen2424_0039 YP_833686 116688063 Protein 43084 42596 flagellar motor switch protein FliN ATGAGTGAGCTGAACCAGACGCCCGACGACGACATCCAGGCGATGGCCGATGCGGCCCTCGCGGCGTCGGCTGCCGACGCGAAGGCGCCGGCCGCGGCCGAGGAAGATCCGGGCATGGACGACTGGGCGGCCGCGCTCGCCGAGCAGAACGAGCAACCGGTGCAGGCGGGCGCGACGGGCGCCGGCGTGTTCCAGCCGCTGTCGAAGGCCGCGGCGAGCTCGACGCACAACGACATCGAGATGATCCTCGACATCCCGGTCAAGATGACCGTGGAGCTCGGCCGCACGAAGATCGCGATCCGCAACCTGCTGCAACTCGCGCAAGGGTCGGTCGTCGAGCTCGACGGCATGGCCGGCGAGCCGATGGACGTGCTCGTGAACGGCTGCCTGATCGCGCAGGGCGAAGTCGTGGTGGTCAACGACAAGTTCGGTATTCGCCTCACCGACATCATCACGCCGGCCGAACGCATCCGGAAGCTGAATCGATGA MSELNQTPDDDIQAMADAALAASAADAKAPAAAEEDPGMDDWAAALAEQNEQPVQAGATGAGVFQPLSKAAASSTHNDIEMILDIPVKMTVELGRTKIAIRNLLQLAQGSVVELDGMAGEPMDVLVNGCLIAQGEVVVVNDKFGIRLTDIITPAERIRKLNR TIGRFAM: flagellar motor switch protein FliNPFAM: surface presentation of antigens (SPOA) proteinKEGG: bcn:Bcen_0031 flagellar motor switch FliN ; Cytoplasmic Membrane Class 3 TIGR02480 fliN flagellar motor switch protein FliN equivalog_domain 2.4e-39 Cellular processes Chemotaxis and motility PF01052 SpoA, Surface presentation of antigens (SPOA) protein.. COG1886 FliN, Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0040 YP_833687 116688064 Protein 44075 43077 flagellar motor switch protein FliM ATGGGTCACCAGGAGTTCATGTCCCAGGAGGAGGTCGATGCCCTCCTCAAGGGCGTCACGGGCGAAACCGATGCAGTCGACGAGCAGCGCGACACATCGGGCGTCCGCCCCTACAACATCGCGACGCAGGAGCGGATCGTCCGCGGCCGGATGCCCGGCCTCGAGATCATCAACGACCGCTTCGCGCGCCTGTTGCGGATCGGCATCTTCAACTTCATGCGGCGCACGGCGGAAATTTCCGTCAGCCAGGTGAAGGTGCAGAAGTACAGCGAATTCACCCGCAACCTGCCGATCCCGACCAACCTGAACCTGGTGCACGTGAAGCCGCTGCGCGGCACGTCGCTGTTCGTGTTCGACCCGAACCTCGTGTTCTTCGTCGTCGACAACCTGTTCGGCGGCGACGGGCGCTTTCACACGCGCGTCGAGGGCCGCGATTTCACGGCCACCGAGCAGCGGATCATCGGCAAGCTGCTGAACCTCGTGTTCGAGCACTACACGACCGCGTGGAAGAGCGTGCGGCCGCTGCAGTTCGAATTCGTGCGTTCCGAGATGCACACGCAGTTCGCGAACGTCGCGACGCCGAACGAGATCGTGATCGTCACGCAGTTCTCGATCGAGTTCGGGCCGACCGGCGGCACGCTGCACATCTGCATGCCGTACTCGATGATCGAACCGATCCGCGACGTGCTCAGCTCGCCGATCCAGGGCGAGGCGCTCGAAGTCGACCGCCGCTGGGTGCGCGTGCTGTCGCAGCAGGTGCAGGCCGCGGAAGTCGAGCTGACCGCGAATCTCGCCGAGATCTCGTCGACGTTCGAGAAGATCCTGAACCTGCGCGCGGGCGACGTGCTGCCGCTGGAGATCGAGGACACGATCACCGCGAAGGTCGACGGCGTGCCGGTGATGGAGTGCGGCTACGGAATTTTCAATGGTCAATATGCGTTGCGCGTGCAGAAGATGATCGGCGCGAGCGATTCGATGAAGGAAGGTGGATATGAGTGA MGHQEFMSQEEVDALLKGVTGETDAVDEQRDTSGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEISVSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLVFEHYTTAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALEVDRRWVRVLSQQVQAAEVELTANLAEISSTFEKILNLRAGDVLPLEIEDTITAKVDGVPVMECGYGIFNGQYALRVQKMIGASDSMKEGGYE PFAM: surface presentation of antigens (SPOA) protein ; Cytoplasmic Class 3 GO:0009288 ; TIGR01397 fliM_switch flagellar motor switch protein FliM equivalog 4.4e-101 Cellular processes Chemotaxis and motility PF02154 FliM, Flagellar motor switch protein FliM.. COG1868 FliM, Flagellar motor switch protein [Cell motility and secretion]. Cell motility and secretion NC_008542 Chromosome1 Bcen2424_0041 YP_833688 116688065 Protein 44631 44098 flagellar basal body-associated protein FliL ATGCATGCTACGAGACATCACGCACGCATTCACATGGCCACGACTGCAACTCCGACCGCCGACAAGCCGGCTTCGTCCGGCAAGTTCAAGCGCATCGCGCTCATCGCCGTCATCGCGCTGGGCGCGGCTGCCGCCGCCGCCGGCGGCATGTACGTGTTCCTGAACAAGGCAGGCGTCGGCCATCCGAGCGCGCCCGCCGAGCCGGCGCCGCTTGCCGCGCCGGTGTTCTTCCCGCTCGACCCGCTGACCGTGAACCTGCAGTCCGACGACGGCGCGCAGCACTACCTGCGCGTCGGCCTGTCGCTGAAGCTCACCGATCCGAAGGCGCAGGAGCAACTGACCGCGCGGATGCCGGAAATCCGCAGCCGGATCCTGCTCGCGCTGTCGAACAAGCATCCCGAGGAGCTCGCGACGCCGGAGGGCAAGCGCTCGCTCGCGACGGAGCTGCGGGAGCTGATCGAACAGCCGACGCAGCCGGGCAACCAGCGCGCGAAGGTCGACGACGTCCTGTTCACCGAGTTCGTCGTCCAGTAA MHATRHHARIHMATTATPTADKPASSGKFKRIALIAVIALGAAAAAAGGMYVFLNKAGVGHPSAPAEPAPLAAPVFFPLDPLTVNLQSDDGAQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPEELATPEGKRSLATELRELIEQPTQPGNQRAKVDDVLFTEFVVQ PFAM: flagellar basal body-associated protein FliLKEGG: bcn:Bcen_0029 flagellar basal body-associated protein FliL ; Cytoplasmic Membrane Class 3 PF03748 FliL, Flagellar basal body-associated protein FliL. This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.. COG1580 FliL, Flagellar basal body-associated protein [Cell motility and secretion]. Cell motility and secretion NC_008542 Chromosome1 Bcen2424_0042 YP_833689 116688066 Protein 45566 44844 LrgB family protein ATGCTCGCCGCGCTATCGAACCTGCCCGCCGACCGGGTGAATACCGCGATCTCCGTCGGCTGCTTCGTGCTGACGATCGTGCTGTATTTCGCGTCGAAGCGGCTCTACGCGTACAAGAAGACGCTGCTGTTCTCGCCGCTCGTGTTCGTGCCGGGCGTGCTGGTGCTGCTCGTGCTGCTGACCGGCATCCCGTATTCGGTCTATTTCCGCGATACGCGCTGGCTGATGTGGCTGCTCGGCCCGGCGACGATCGCGTTCGCGGTGCCGATCTACGACTATCGTGACCTGATCCGCCGCCACTGGCTGTCGTTGTCGGTCGGCGTCGCGGTCGGGATCGCCGCGGGCGTATGCGGGTCGCTGCTGCTCGCGAAGCTGCTGCACCTGTCGCCCGAGCTGCAGCGCTCGCTGATGACGCGCTCGGTGTCGACGCCGTTCGCGCTCGCCGTGTCGGACAAGATCCACGCGCCGAAGGATCTCACCGCCCTGTTCGTGATCGCGACCGGCATCTGCGGGATGCTGCTCGGCGAGCTCGTGCTGGCGCTCGTGCCGATGCGCACGCGGCTCGCGCGCGGCGCGCTGTTCGGCGCGGCCGCCCATGGCGTGGGCACCGCGAAGGCGCGCGAGATCGGCAACGAGGAAGGCGTCGTGTCGAGCCTGACGATGATGATCGCGGGCGTCGCGATGGTGCTGATCGCGCCGTTGCTCACGCTGCTGCCGATCTGA MLAALSNLPADRVNTAISVGCFVLTIVLYFASKRLYAYKKTLLFSPLVFVPGVLVLLVLLTGIPYSVYFRDTRWLMWLLGPATIAFAVPIYDYRDLIRRHWLSLSVGVAVGIAAGVCGSLLLAKLLHLSPELQRSLMTRSVSTPFALAVSDKIHAPKDLTALFVIATGICGMLLGELVLALVPMRTRLARGALFGAAAHGVGTAKAREIGNEEGVVSSLTMMIAGVAMVLIAPLLTLLPI PFAM: LrgB family proteinKEGG: bcn:Bcen_0028 LrgB-like protein ; Cytoplasmic Membrane Class 3 TIGR00659 TIGR00659 conserved hypothetical protein TIGR00659 hypoth_equivalog 1.7e-42 Hypothetical proteins Conserved Hypothetical proteins PF04172 LrgB, LrgB-like family. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.. COG1346 LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]. Cell envelope biogenesis, outer membrane NC_008542 Chromosome1 Bcen2424_0043 YP_833690 116688067 Protein 46053 45580 LrgA family protein ATGAACAAGCCGACCGCCACTGCCGCCGCCCGCCCCGCCGCTTCGGGCAGCCTCGCGCACACGGGCCGGATCGTGCTGCAGGCCACCGCGCTCGGCGTGCTGTGGATGGCGGTCGACTGGGCCGTGCGCACGGTCGGGCTGCCGGTTCCGTCCGGCGTGATCGGCCTCGCGGTGCTCCTCGTGCTGCTGTTCTCGGGCCGCGTCGCGCCGGCGTGGGTGAAGGACGGCGCGAACTGGCTCTTGTCCGACATGCTGCTGTTCTTCGTGCCGGCCGCCGTCGCGGCCGTGCAGTACGGCGGGCTGTTCCGCGAGGACGGCTGGCGCATCGCGCTGGTGATGCTCGCCGGCACCGCGTTCGTGATGGTCGCGGTGGCCGTCGCGGTCGATCTCGCCGCGAAGCTCGAACGCCGGCTCGCCGCGCAGCGCGTGTTCGCGGAGCGCCGCCGCGCGCGCCTGAGCGCCGTCGCTCACTGA MNKPTATAAARPAASGSLAHTGRIVLQATALGVLWMAVDWAVRTVGLPVPSGVIGLAVLLVLLFSGRVAPAWVKDGANWLLSDMLLFFVPAAVAAVQYGGLFREDGWRIALVMLAGTAFVMVAVAVAVDLAAKLERRLAAQRVFAERRRARLSAVAH PFAM: LrgA family proteinKEGG: bcn:Bcen_0027 LrgA ; Cytoplasmic Membrane Class 3 PF03788 LrgA, LrgA family. This family is uncharacterised. It contains the protein LrgA that has been hypothesised to export murein hydrolases.. COG1380 COG1380, Putative effector of murein hydrolase LrgA [General function prediction only]. General function prediction only NC_008542 Chromosome1 Bcen2424_0044 YP_833691 116688068 Protein 46195 47121 transcriptional regulator, LysR family ATGGAATTGCGCGCGTTGCGGTACTTCGTCGAGGTGGTTCGCCAGCAGAGCTTCACCGCGGCGGCCGACCGGCTGTTCGTCACGCAGCCGACCATCAGCAAGATGGTGAAGGCGCTGGAGGACGAGATCGGTTCGCCGCTGCTGCTGCGCGACGGCCGGCAGATGGTGCTGACCGACGCCGGGCGGATCGTGTTCCAGCGCGGCCAGGACGTGCTCGCCGCGCAGGCGCAGCTGCAGTCGGAGCTGAACGATCTCGGCACGCTCGGGCGCGGCGAGCTGACGATCGGCATCCCGCCGCTCGGCGGTTCGCTGTTCACGCCGATCATCGCCGCGTACAAGCAGCGCTACCCGAACATCGAGCTGAAGCTGTTCGAGCAGGGCGCGCGGATGATCGAGGCCGCGCTGATGTCGGGCGAGCTGGAACTCGGCGGCCTGCTGGAGCCGGTCGATCCCGGCACGTTCGAGCGGCTGCCGATGGTGCGCGCGCCGCTGTGGCTCGTCGCGCCGCGCGAGTCGCGCTGGGAGGACCACGCGGCCGTGCCGCTCGCGGATCTCGCGCGCGAATCGTTCGTGTTCTATGCGGAAAGCCTCGCGCTGCACGATGCGGTGCTCGATGCGTGCCGCCAGGCCGGCTTCATGCCGTCGATCGTGAGCCGCAGCGGCCACTGGGATTTCATGGCCGCGCTCGTGCATGCGGGCGTCGGCATCGCGCTGCTGCCCGAGCCGTATTGCCGGCGGCTCGACGCGAGCCAGTTCACGTGCCGGCCGATCGTCGAGCCGGAAATCACGTGGGCGATCGCGCTCGGCTGGCTGAAGAAGGGCTACCTGTCGCATGCGGCGCGCGCATGGCTCGACGTCGCGCGGGCGACGCTGCCGCTCGCGCCGGCCGACGATCTGGCGTTCGGGGGATTGCGGGCGCGGGAGTGA MELRALRYFVEVVRQQSFTAAADRLFVTQPTISKMVKALEDEIGSPLLLRDGRQMVLTDAGRIVFQRGQDVLAAQAQLQSELNDLGTLGRGELTIGIPPLGGSLFTPIIAAYKQRYPNIELKLFEQGARMIEAALMSGELELGGLLEPVDPGTFERLPMVRAPLWLVAPRESRWEDHAAVPLADLARESFVFYAESLALHDAVLDACRQAGFMPSIVSRSGHWDFMAALVHAGVGIALLPEPYCRRLDASQFTCRPIVEPEITWAIALGWLKKGYLSHAARAWLDVARATLPLAPADDLAFGGLRARE PFAM: regulatory protein, LysR ; Cytoplasmic Membrane Class 3 GO:0019619 ; TIGR02424 TF_pcaQ pca operon transcription factor PcaQ equivalog 4.1e-06 Regulatory functions DNA interactions PF03466 LysR_substrate, LysR substrate binding domain. The structure of this domain is known and is similar to the periplasmic binding proteins.. COG0583 LysR, Transcriptional regulator [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0045 YP_833692 116688069 Protein 47532 47146 PilT protein domain protein GTGAAACTGCTGCTCGACACGCACCTGATTCTTTGGGCGGCCGCGGACGCGACCGAATTGCCCGATCGAGCCCGTACGCTCATCGAGGATCCCGCCTATACCCTGTTGTTCAGCGTCGCGAGTCTCTGGGAGATCGTGATCAAGCGTGGGCTCGACCGCAATGATTTTCAGGTCGATCCGCACGTGCTGCGTCGCAATCTGCTCGACGCCGGCTACGTCGAATCGCCGATCACGAGCGCACATGTCCTCGCAGTCGAGCAACTGCCGCTGGTGCATCGCGATCCGTTCGATCGGCTGCTGATTGCCCAGGCGATTGCAGAAGGCGTTACGTTTCTCACGCACGACCATACGGTTGCCCGGTATCCGGGCCCGATTCGGCACGTCTGA MKLLLDTHLILWAAADATELPDRARTLIEDPAYTLLFSVASLWEIVIKRGLDRNDFQVDPHVLRRNLLDAGYVESPITSAHVLAVEQLPLVHRDPFDRLLIAQAIAEGVTFLTHDHTVARYPGPIRHV PFAM: PilT protein domain proteinKEGG: bcn:Bcen_0025 PilT protein-like ; Cytoplasmic Class 3 PF01850 PIN, PIN domain. This PIN (PilT N terminus) domain is a compact domain of about 100 amino acids. The domain has two nearly invariant aspartates. The function of the PIN domain is unknown but a role in signaling appears likely given the presence of this domain in StbB and DIS3.. COG3744 COG3744, Uncharacterized protein conserved in bacteria [Function unknown]. Function unknown NC_008542 Chromosome1 Bcen2424_0046 YP_833693 116688070 Protein 47777 47529 prevent-host-death family protein ATGCAGACCTACAACATGCATGACGCGAAGACGAACCTGTCGCGTCTGATCGACGAGGCAGTTCACGCGGGTGAACCGTTCGTGATCGCGAAGGCCGGCAAGCCGCTCGTCAAGGTTGTGCCGATCGATGCGCCCGAGGCGACGCGACCGGCGCGGATCGGTTTCATGAAGGGTCAAATCGTGGTGCCGGCCGACTTCGATACGATGGGTGACGATGCCATCCGGAAGCTGTTCGAGGGCGACGCGTGA MQTYNMHDAKTNLSRLIDEAVHAGEPFVIAKAGKPLVKVVPIDAPEATRPARIGFMKGQIVVPADFDTMGDDAIRKLFEGDA TIGRFAM: prevent-host-death family proteinPFAM: protein of unknown function DUF172KEGG: bcn:Bcen_0024 prevent-host-death protein ; Unknown Class 3 GO:0008219 ; TIGR01552 phd_fam prevent-host-death family protein subfamily 4.2e-05 Mobile and extrachromosomal element functions Other COG4118 Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]. Cell division and chromosome partitioning NC_008542 Chromosome1 Bcen2424_0047 YP_833694 116688071 Protein 49445 47883 drug resistance transporter, EmrB/QacA subfamily ATGTCCGCCACCACGGCATCCGCCCCCTCCCCCGCTGCCGAACCGGCGCCGCTGACCGGCGGCGCGCTCGCACTGCTGACCGTCGGGCTCGCGCTCGGCACCTTCATGGAAGTGCTCGACACGTCGATCGCGAACGTCGCGGTGCCGACCATCTCGGGCAGCCTCGGCGTCGCGACGAGCGAGGGCACGTGGGTGATTTCGTCGTACTCGGTCGCGTCCGCGATCGCGGTGCCGCTGACCGGCTGGCTCGCGCGCCGGGTCGGCGAGGTGCGCCTGTTCACGCTGTCGGTGCTCGCGTTCACGATCGCGTCGGCGCTGTGCGGCTTCGCGACCAACTTCGAGACGCTGATCGCGTTCCGGCTGCTGCAGGGCCTCGTGTCCGGGCCGATGGTGCCGCTGTCGCAGACGATTCTGATGCGCAGCTACCCACCCGCGAAACGCGGGCTCGCGCTCGGGCTATGGGCGATGACGGTGATCGTCGCGCCGATCTTCGGCCCGCTGCTGGGCGGCTGGATCAGCGACAACTACACGTGGCCGTGGATCTTCTACATCAACCTGCCGATCGGCGTGTTCTCGGCGACCTGCGCGTATTTCCTGCTGCGCGGCCGCGAGACGAAGACGTCGAAGCAGCGGATCGACGCGATCGGCCTCGCGCTGCTCGTGATCGGCGTGTCGTGCCTGCAGATGATGCTCGACCTCGGCAAGGACCGCGACTGGTTCAACTCGACCTTCATCGTCGCGCTCGCGCTGATCGCGGTCGTGTCGCTCGCGTTCATGCTCGTGTGGGAGGCGACCGAGAAGGAGCCGGTGGTCGACCTGTCGCTCTTCAAGGACCGCAACTTCGCGCTCGGCGCGCTGATCATCTCGTTCGGCTTCATGGCGTTCTTCGGCTCGGTCGTGATCTTCCCGCTGTGGCTGCAGACGGTGATGGGCTACACGGCCGGCAAGGCCGGCCTCGCGACCGCGCCGGTCGGGCTGCTCGCGCTGGTGCTGTCGCCGCTGATCGGCCGCAACATGCACCGGCTCGACCTGCGGATGGTCGCGAGCTTCGCGTTCATCGTGTTCGCGGGCGTGTCGCTGTGGAACGCGACGTTTACGCTCGACGTGCCGTTCAACCACGTGATCCTGCCGCGGCTCGTGCAGGGCATCGGCGTCGCGTGCTTCTTCGTGCCGATGACGACGATCACGCTGTCGAGCATCTCCGACGAGCGGCTCGCGAGTGCGTCGGGGCTGTCGAACTTCCTGCGCACGCTGTCCGGCGCGATCGGCACCGCGGCCAGCTCGACGTTCTGGGAGAACGACGCGATCTACCATCATGCGCGGCTGTCGGAATCGGTGAGCATCTACGCGCAGAACACGACCGACTACCAGGGCGCGCTCGCGCAGCTCGGCATCGTCGGCCAGACGGCCAATGCGCAACTCAACCAGCTCGTCACGCAGCAAGGCTTCATGATGGCGACCAACGACTTCTTCCATCTGTCGGCGGGCGTGTTCGTCGCGCTCGCGGCGCTCGTGTGGATCACGAAGCCGAAGAAGGGCGCAGGGCCCGCGATGGGGCATTGA MSATTASAPSPAAEPAPLTGGALALLTVGLALGTFMEVLDTSIANVAVPTISGSLGVATSEGTWVISSYSVASAIAVPLTGWLARRVGEVRLFTLSVLAFTIASALCGFATNFETLIAFRLLQGLVSGPMVPLSQTILMRSYPPAKRGLALGLWAMTVIVAPIFGPLLGGWISDNYTWPWIFYINLPIGVFSATCAYFLLRGRETKTSKQRIDAIGLALLVIGVSCLQMMLDLGKDRDWFNSTFIVALALIAVVSLAFMLVWEATEKEPVVDLSLFKDRNFALGALIISFGFMAFFGSVVIFPLWLQTVMGYTAGKAGLATAPVGLLALVLSPLIGRNMHRLDLRMVASFAFIVFAGVSLWNATFTLDVPFNHVILPRLVQGIGVACFFVPMTTITLSSISDERLASASGLSNFLRTLSGAIGTAASSTFWENDAIYHHARLSESVSIYAQNTTDYQGALAQLGIVGQTANAQLNQLVTQQGFMMATNDFFHLSAGVFVALAALVWITKPKKGAGPAMGH TIGRFAM: drug resistance transporter, EmrB/QacA subfamilyPFAM: major facilitator superfamily MFS_1KEGG: bcn:Bcen_0023 drug resistance transporter EmrB/QacA subfamily ; Cytoplasmic Membrane Class 3 GO:0042493 ; TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily subfamily 1.5e-195 Transport and binding proteins Other PF06609 TRI12, Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.. COG2814 AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]. Carbohydrate transport and metabolism NC_008542 Chromosome1 Bcen2424_0048 YP_833695 116688072 Protein 50110 49622 transcriptional regulator, MarR family ATGACCGGCGGCCTCTACGATCCCGAGAACATCGCGCTGGAAACGAGCCTCGGCTATTACCTGTCGAAGGCGAAGCAGGCGCTCGTCGAGCGGATGGATCGCGCGCTCGAGCCGTTCGACCTCACCGCGCAGCAGATCGGCGTGATCCTGCTGCTGTCGCGCGGCTACGCGCGCACGCCGTTCGAACTGTCGCGCAAGATGTCGTACGACAGCGGCTCGATGACGCGCATGCTCGACCGGCTCGAACGCAAGGGACTGATCGCACGGGCGCGCAGCGAGCAGGACCGCCGGATGATCGAGCTGACGCTGACCGAGCGCGGCATCGAAGCCGCCCGCGCGCTGCCGTCGCTGGTCGCGACCGTGCTCAACGCGCAACTCGAAGGCTTCTCGGCCGACGAACTCGCGACGCTCACCGGCCTGCTGCAACGCTTCATCGCCAACGGGCCCGGTTCGACCGGCTGCCCGAAGCCCGACGAACCCGATTGCTGA MTGGLYDPENIALETSLGYYLSKAKQALVERMDRALEPFDLTAQQIGVILLLSRGYARTPFELSRKMSYDSGSMTRMLDRLERKGLIARARSEQDRRMIELTLTERGIEAARALPSLVATVLNAQLEGFSADELATLTGLLQRFIANGPGSTGCPKPDEPDC PFAM: regulatory protein, MarRKEGG: bcn:Bcen_0022 transcriptional regulator, MarR family ; Unknown Class 3 TIGR02337 HpaR homoprotocatechuate degradation operon regulator, HpaR No data 7.9e-07 No data No data PF01047 MarR, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.. COG1846 MarR, Transcriptional regulators [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0049 YP_833696 116688073 Protein 50285 50572 hypothetical protein ATGCTGTTCCTGAAAAATGCCGCCGGCGCGCTGCGCCGCAACCTGACCGATACCGCTCATCATGTGTTCTCCGGCCCGCACCGCGGCTGGAAGATCGCGCTGTACGTGACGATGCTGGTCGTGCCTGGCGGCTCGCTCGCGGCGCTCGGGTTCGCATGGTTCGATCATCGCCGGCAGCGCAACGCGAAAAATGCCGCCCGCCGCACGAGCCAGCCGGCCGCGACGGAGCCGTCGACATGGCGGGCTGCCGCCGCCGAACCCGTCCCGGTGCCCGTGCGCTGCCACTGA MLFLKNAAGALRRNLTDTAHHVFSGPHRGWKIALYVTMLVVPGGSLAALGFAWFDHRRQRNAKNAARRTSQPAATEPSTWRAAAAEPVPVPVRCH KEGG: bcn:Bcen_0021 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0050 YP_833697 116688074 Protein 50854 52425 RND efflux system, outer membrane lipoprotein, NodT family ATGCCGTACGCCTCCCTCCCGCGCGCCGTTCGCCCGCTGAGCGCCGCCGTCGCCATTGCGACGGCCGTGCTGCTCGCCGGCTGCGCCGTCGGGCCCGACTATCACCGCCCCGACACGTCGATCCCCGCCGCGTTCAAGGAAGCGCCGGCCGGCTGGAAAGTCGCGCAACCCGCCGATCGCACCGACCGCGGCGCGTGGTGGACGGTCTACAACGATCCGCAGCTCGATGCGCTGATCGGCAGGCTCAACGCGTCGAACCAGACCATCGCGCAATCGGCGGCCGCCTACCGGCAGGCGCGCGCGCTCGTCACCGAGGCGCGCGCCGCGTATTTCCCGACCGTCGGGCTGACCGCATCGGGCTCGCGCGCACGGACGCCGCGCACGTCGCTGTCGTCGGGTTCGTCGTCGAATTTCGGCAGCGGGTCGACCGGATCGATCAACAACAGCTACAGCGTCGGCCTCGACGCCAGTTGGGAACCCGACCTGTGGGGCAAGGTGAGCCGCACCGTCAGCGCGCAGCGCGCCGGCGAAGCGGCCGCCGCGGCCGACCTCGCGAACGCGCGGCTGTCGCAGCAGGCGCTGCTCGCGCAGACCTATTTCCAGTTGCGTACGTCCGATGCGCTGCAAAAGCTGCTCGACGACACCGTGAAGTCGTATGAACGCTCGCTGCAGCTCACGCAGAACCAGTACGCGCAGGGCGTCGCCGCGCGCGCCGACGTGATCCAGGCGCAAACGCAGCTGCAGAGCGCGCAGGCCGCGCAGATCGACAACGGCGTCGCCCGCGCGCAGTACGAGCATGCGATCGCGACGCTGATCGGCGAGCCCGCGTCGACCTTCTCGCTGCCGCCGAATCCGCTCGCGGCCGAACCGCCGGTCACGCCGGTCGACGTGCCGTCCGCGATCCTCGAGCGCCGGCCCGACATCGCGGCGGCCGAGCGCCGCGCGGCGGCCGCGAACGAGCAGATCGGCGTCGCGATCTCGGCGTTTTTCCCGACGCTCACGTTGTCGGCCACCGGCGGCTCCCAGAGCTCGGTGTGGTCGCAACTGTTCACGCTGCCGGCGCGCTTCTGGACGGTCGGCCCGCAGCTCGCGGCCACGCTGTTCGACGCAGGGCTGCGCGCCGCGCAGACCGACGCCGCGCGCGCGACCTACGACCAGGACGTCGCCGCCTATCGCCTCGCGGTGCTCACCGCGTTCCAGGACGTCGAGGACAACCTCGCGTCGCAGCGCATTCTCGCGCAGGAAATCGACGTGCAGCGGCAGGCCGTCGACAGCGCCGAGCACGCGCTCGCGATCGTCACGAACCAGTACAAGGCCGGCACGGTCGCGTACCTGAACGTGCTGACCGCGCAGACCACCGCGTTCACCGCGCAGCAAAAGCTCGCGACGATCGCCGGGCAGCGGATGGTGTCGTCGGTCGGGCTCGTGAAGGCGCTCGGCGGCGGCTGGAACGTATCGGAGATGGCGCGCGAGAACGGCGACATGGCGGCGCCGGCGCCCTTGCCGGCGTCCGGTACGGCCGCGCCCGCGGCCACCGCACCGTCGGCCGCCGCGCCGCTCGCGCAGAAGTAG MPYASLPRAVRPLSAAVAIATAVLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPADRTDRGAWWTVYNDPQLDALIGRLNASNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASGSRARTPRTSLSSGSSSNFGSGSTGSINNSYSVGLDASWEPDLWGKVSRTVSAQRAGEAAAAADLANARLSQQALLAQTYFQLRTSDALQKLLDDTVKSYERSLQLTQNQYAQGVAARADVIQAQTQLQSAQAAQIDNGVARAQYEHAIATLIGEPASTFSLPPNPLAAEPPVTPVDVPSAILERRPDIAAAERRAAAANEQIGVAISAFFPTLTLSATGGSQSSVWSQLFTLPARFWTVGPQLAATLFDAGLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQRQAVDSAEHALAIVTNQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGWNVSEMARENGDMAAPAPLPASGTAAPAATAPSAAAPLAQK TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT familyPFAM: outer membrane efflux proteinKEGG: bcn:Bcen_0020 RND efflux system, outer membrane lipoprotein, NodT ; Outer Membrane Class 3 TIGR01845 RND_outer_NodT RND efflux system, outer membrane lipoprotein, NodT family subfamily 5e-160 Transport and binding proteins Other PF02321 OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.. COG1538 TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]. Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0051 YP_833698 116688075 Protein 53281 52457 hypothetical protein ATGACGGCAGTGGATGACGCAAACGAAGGCCGGCCAATGCGGCCGTGGGTGAGACGGCTCGTCACCGTGTTGCCGTGGGTGCTGGCAGGCGGCCTGGCGACGGCGGTGACGCTCGTCGCGCTCGCGCCGGCCGCGTGGATCGCGCCGCAGTTCGCGCGTGCGACCGGCGGCCACGTGAATCTCGCCGATCCGGACGGGTCGCTGTGGCACGGCTCGGGCACGCTGATGCTCGCGCCGGGCGCCGACCAGAGCGCGGCAACGCTGCTGCCGGGCCGGGTCGAATGGACCACGCGCTTCTGGCCGTTGCTGACCGGGCGTGTGCAGATGCGCATGCGGCAGACCGAAGCGATGCCCGATGCGGTCACGCTCGATGCGACGTGGCGCGGCGCGGTGCTGTCGGCGGGCACGATGGCCGTGCCTGCGTCGCTGCTCACCGGGCTCGGCACGCCGTTCAACACGCTCGACCTGCAGGGCGACGTGCGGCTCGGCTGGAGCGACTGGCGGTTGATCGGCAACAACGCGTTCGGCCAGCTGACGGTGACGATCGATTCGATGAGTTCGCGCGTGTCGCGCGTGAAGCCGCTCGGTTCGTACCGTGCGGTATTGCAGGCGAAGGGCGTGGGCGCCGATCTCGACCTGTCGACGACGCAGGGCCCGCTGTTCCTCGACGGGCACGGCAGCTTCGGCCCCGGCCAGGGATCGTTCCGCGGCACCGCGCATGCGGCGCCCGAGCAGCAGGCGAACCTCGCCGGGCTGCTGAACCTGCTCGGCCACCCGATCGGCAACAACCAGGTGTCGCTGATCTTCGGCGACGCGCAGCGCTGA MTAVDDANEGRPMRPWVRRLVTVLPWVLAGGLATAVTLVALAPAAWIAPQFARATGGHVNLADPDGSLWHGSGTLMLAPGADQSAATLLPGRVEWTTRFWPLLTGRVQMRMRQTEAMPDAVTLDATWRGAVLSAGTMAVPASLLTGLGTPFNTLDLQGDVRLGWSDWRLIGNNAFGQLTVTIDSMSSRVSRVKPLGSYRAVLQAKGVGADLDLSTTQGPLFLDGHGSFGPGQGSFRGTAHAAPEQQANLAGLLNLLGHPIGNNQVSLIFGDAQR KEGG: bcn:Bcen_0019 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0052 YP_833699 116688076 Protein 53788 53282 General secretion pathway M protein ATGAAAGCCGAACAACTGAACCAGACGCTGGCCCAGTTCTGGGGCGAGCGCACGCCGCGCGAGAAGACGCTGCTCGGCTGGGGCGGCGCCGTGCTGGCGATCGCGATCGCGTATTCGGTGCTGTGGTCGCCCGCGCAGGAGGGCCGCGCGAGGATTCAGCGCGAGCTGCCCGCGATGCGCCACGAACTCGCGCAGATGACCGCGCAGGCGAACGAGGCGAAGTCGCTGGCCACCGCCGCGCAGGGTGTCGCGCCGACCGGCCTCGCGCTGAAGGATGCGCTCACTGCATCGCTGTCCGATCACGGGCTGCAGGGCGCGCAGGTGCAGATCGTCGGCAATGGCGTGCAGATCCAGATGAAGAACGTGTCGTTCCCGGCATGGGCCCAGTGGCTCGACGATGCGCGCCGACAGTTCAAGGTGCAGGTCGGCGAGGCGCATGCGACGGCGCTGAAGGAAGACGGTCAGGTGGATCTGACGGCCGTGATGCAGCCTTCCGTCCAGAAATAG MKAEQLNQTLAQFWGERTPREKTLLGWGGAVLAIAIAYSVLWSPAQEGRARIQRELPAMRHELAQMTAQANEAKSLATAAQGVAPTGLALKDALTASLSDHGLQGAQVQIVGNGVQIQMKNVSFPAWAQWLDDARRQFKVQVGEAHATALKEDGQVDLTAVMQPSVQK PFAM: General secretion pathway M proteinKEGG: bcn:Bcen_0018 general secretion pathway M protein ; Unknown Class 3 PF04612 GspM, General secretion pathway, M protein. This is a family of membrane proteins involved in the secretion of a number of molecules in Gram-negative bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the EpsM protein interacts with the EpsL protein, and also forms homodimers.. COG3149 PulM, Type II secretory pathway, component PulM [Intracellular trafficking and secretion]. Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0053 YP_833700 116688077 Protein 55158 53785 general secretion pathway protein L GTGAGCACGTTGATTGTTTCTTTGCCGCCGCGCGAGCCTGCCGTGCCGTTGCAGGAATGGCAGTGGCCCGAGCTGCCGTTCACGCTCGTCGACAAGGCCGGCCAGGTGCAGCGCGCGGGCCGCGCCGCGCTCGCGCTGCTGCCGCGCGCGAACGCGACGGTGCTGATCGTCGCCGCACGCGACGTGCTGCTGCTGGCCGCGACCGTGCCGCCGCTGAAGGGGCCGAAGCTGCGCCAGGCGCTGCCCAACATCGTCGAGGATCAACTGATCCAGGACCCGCTCGGCTGCCACATCGCGCTCGATCCGGCCGCGCTGCCCGACGGGCGTCGCGTACTGGCCGTCGTCGACCGCGCGTGGTTCCGCACGATCTGCGACGCGTTCACCGCGGCCGGCCACCGGCACCTGAGCGCGGTGCCCGCGACCCGCTGCCTGCCGGCGCCGCGTGCGTCGGCCGAAGCGGCCTCCGCCGTGTTGGCCGACGGCCAGGCTACCGACGCCGCCGCGCTCGTCGCGGACGTCACCGAGCCGCCTGCCCGCCCGCCGACGGTCGCCGCGGTGCTCGGACTCGCGACGGCGGTCGAACCGGTGCTCGTCGAAGCCGGCGCGCTGCCGGCCGCGGCCGGGGCGCCGCGCCTCGAGCTGGCGGTCGCGCGCGGCGCGCTCGGCGAAGGCTTCGCGGCGCCCGCGTCGCGCGCGGCCGGCACGCTGGCCGCGCTCGCGGGCGGCGGCGACGTCGAACTGTACGAACTCGGCGAACCGGGCGCGGAGCCGCGGCTCGCGTCGGTCGGTCGCACCGACGCGGCGCTGCTGCCGGGCGCCGCGCCGCTGTCGTTCGACACGTTCGCGCGCCGGGCGCTGACCGAACCATTCGATCTGTGCCAGTTCGAATTCGAATCGCAGCCGTGGCGCTTCGACCGCGCGACGGTGAAGCGCCTGCGCGTGCCGATCGCGCTGGCCGCGGCGACGCTCGGCGTCGCGGTGATCGGGATGAACCTGCACTGGTGGAAGCTGTCGCGTGAGCGCGATGCGCTGTCCGCGCAGATCACCGAGACGCTGCTGTCTGCCTTCCCGAAGACGACCACCGTGCTCGATCCGCCCGCGCAGATGCAGCGCCAGCTCGACCAGCTTCGGCTCGCGGCCGGCGAGCTGTCGCCGAACGATTTCCTCGCGCTGTCGAGCGGCTTGTCGCGCTCGATGGGCGCGCTGCCGCTGAACGGCATCGCGTCGCTCGACTATCACGACCGGCGGCTCGACGTCGGCTTCAAGCCGGAGGTCAAGGTCGATCCCGATTTCACGCAGCGCCTCGCGCGTAACGGACTGTCCGGCGAAGTCGACAGCAACACGGGCAAATGGACGATCCGGAGCCGCTCATGA MSTLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAARDVLLLAATVPPLKGPKLRQALPNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWFRTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLADGQATDAAALVADVTEPPARPPTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALAGGGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQPWRFDRATVKRLRVPIALAAATLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTTTVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMGALPLNGIASLDYHDRRLDVGFKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS TIGRFAM: general secretion pathway protein LPFAM: General secretion pathway LKEGG: bcn:Bcen_0017 general secretion pathway L ; Unknown Class 3 GO:0015628 ; TIGR01709 typeII_sec_gspL general secretion pathway protein L No data 2.5e-05 No data No data PF05134 GspL, General secretion pathway protein L (GspL). This family consists of general secretion pathway protein L sequences from several gram-negative bacteria. The general secretion pathway of gram-negative bacteria is responsible for extracellular secretion of a number of different proteins, including proteases and toxins. This pathway supports secretion of proteins across the cell envelope in two distinct steps, in which the second step, involving translocation through the outer membrane, is assisted by at least 13 different gene products. GspL is predicted to contain a large cytoplasmic domain and has been shown to interact with the autophosphorylating cytoplasmic membrane protein GspE. It is thought that the tri-molecular complex of GspL, GspE and GspM might be involved in regulating the opening and closing of the secretion pore and/or transducing energy to the site of outer membrane translocation.. COG3297 PulL, Type II secretory pathway, component PulL [Intracellular trafficking and secretion]. Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0054 YP_833701 116688078 Protein 56294 55185 General secretion pathway protein K ATGCGCGCGCGCCCTTTCCGTCGAATGCCTGCCCGCCGCCAGCGCGGCGCCGCGATCATCACCGCGCTGCTCGTGGTCGCGCTGTCGGCGATCCTCGTGTCGGGGATGCTGTGGCGCCAGCAGGTGCAGATCCGCCGCATCGAGAACCAGCGCGTGATCGCGCAGGCGCAGTGGGTCGCGCGCGGTGCGCTCGACTGGACCCGGATGATCCTGCGCTCCGAAGGCGACACGGCGCCCGGCATCACCTATCTCGGCGGAATCTGGGGCGTGCCGATTGCGAAGACGAAGCTGTCGGATTTCCTCGGCCGGATCGGCGCGCCCAACGAAACGGGCGGCGGCGACACTTACCTCTCCGGCTCGATCGAGGACGCGCAGGCGAAGTTCAACCTGCGCAACCTCGTGTCGTCGCCGGCGCCCGGCGTGCTGCAACTGAACGTCACGCAGATGCAGGCGTTCCAGCGCCTGCTGACGACGCTCGGCTACGACAGCGCGTTCGCGAAGCGCATCGCGCTGCAGGTGCGCGCGGGCCTGCTGCATTCGGCCACGCGGTTCCAGATGCCGAACCTGCCCGGCGGCGGCGGGACCGCCGCGAACGCCGCGACCGCGCCGGTGACGAGCGGCGACATGCAGGGCAGCGGCTTCACCGACGATCCCGGCATGGCCGGCGGCGACCGCGGACCCGCGCCGCTGATGATGACGCGCGTCGACAGCCTGCTCGACGTCGACGGCGTGACGCCGGAGATGGTCGCGCGGCTGCGCCCGTTCGTCACGGTGCTGCCGACCACCACGCCCGTGAACATGAACACCGCACCGGCCGAAGTGATCGCCGCGCTGATACCGGGGATGAGCGTGTCGTCCGCGCAGGCGCTCGTGTCGCGCCGCGAGACCGTGTTTTTCCGCAACGTGGGCGACGTGCAGCTCGCGCTGCGCGGCGCCGGCGCGCCGCCGAACGTGACGATCGACTCGAGCCTCGTCGACGTCAATTCGAGCTATTTCATCGTGCATGGCCGGATTCAGCACGAACGCGCGGAGGTCGACCGCACCTCGCTCGTGTATCGTGATCCGACCACGCACTCGACGCGGGTCGTGCGCATCCGCGACCAGCTATAA MRARPFRRMPARRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQRVIAQAQWVARGALDWTRMILRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNETGGGDTYLSGSIEDAQAKFNLRNLVSSPAPGVLQLNVTQMQAFQRLLTTLGYDSAFAKRIALQVRAGLLHSATRFQMPNLPGGGGTAANAATAPVTSGDMQGSGFTDDPGMAGGDRGPAPLMMTRVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALIPGMSVSSAQALVSRRETVFFRNVGDVQLALRGAGAPPNVTIDSSLVDVNSSYFIVHGRIQHERAEVDRTSLVYRDPTTHSTRVVRIRDQL PFAM: General secretion pathway protein KKEGG: bcn:Bcen_0016 general secretion pathway protein K ; Cytoplasmic Membrane Class 3 PF03934 GspK, General secretion pathway protein K. Members of this family are involved in the general secretion pathway. The family includes proteins such as ExeK, PulK, OutX and XcpX.. COG3156 PulK, Type II secretory pathway, component PulK [Intracellular trafficking and secretion]. Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0055 YP_833702 116688079 Protein 56995 56297 general secretion pathway protein ATGAAACCAGCCGTCCGCTCTGACGCGCCGATGCGACGCCCGTCCGCCCTCTCGTCCCGCGCTGCCCGCGGCTTCACGCTGATCGAGCTGATGATCGCGATCGCGATCATCGCGGTGGTGGCGATCCTCGCGTGGCGCGGGCTCGACCAGATCATGCGCGGTCGCGACAAGGTCGCCGCCGCGATGGAGGACGAGCGCGTGTTCGCGCAGATGTTCGACCAGATGCGCATCGACGCGCGGCTCGCCGCGACCGACGACGAGGCCGGCCAGCCGGCGATCGGCGTCGCCGGCAATACGCTGCAGATCGTGCGCGAACTCGACGTGCCGGGCGTCGCGCCGCGGCTGCAGGTGGTCCGCTACCGGATCGCCGGCGGGCGCGTCGTGCGCTACGCATCGCCGCCGATCGACGACACGAACCGGCTGCGCACCGTGCTGAAGGACAGCAGCGTCGAAGGCTGGAGCTGGGTCGCGCTGATGGGCGGCGTCGGCGCGATCGACGCGAAGCTGTACGTGCCGCGCGTGGGCTGGACCACCAACCTGCAGACGGCCGACGACGCGCTCGCGCAGAACAACGATGCGCTGAAGGTGCCGCAGATCGGCAACGCGCCGCCGGCGCGCGCGGTGACCGGGCTGCAGGTCAGCATCGGCGCGACGTCGCTGCGCGTGCCGATCACGCGCATCTTCCTCGTCGGGGAATGA MKPAVRSDAPMRRPSALSSRAARGFTLIELMIAIAIIAVVAILAWRGLDQIMRGRDKVAAAMEDERVFAQMFDQMRIDARLAATDDEAGQPAIGVAGNTLQIVRELDVPGVAPRLQVVRYRIAGGRVVRYASPPIDDTNRLRTVLKDSSVEGWSWVALMGGVGAIDAKLYVPRVGWTTNLQTADDALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPITRIFLVGE KEGG: bcn:Bcen_0015 putative general secretion pathway protein J ; Unknown Class 3 GO:0015628 ; TIGR01711 gspJ general secretion pathway protein J No data 9.4e-05 No data No data COG4795 PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]. Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0056 YP_833703 116688080 Protein 57374 56973 general secretion pathway protein I ATGCGTCGTCGCCTGCCCTTCCCCGTTTCTTCCGCCCGCGGCTTCACGATGATCGAGGTGCTGGTCGCGCTCGCGATCATCGCGGTCGCGCTCGCCGCGTCGATCCGCGCGGTCGGCACGATGGCGACCAACGCATCCGAGCTGCATCGCCGCCTGCTGGCCGGCTGGAGCGCCGACAACGCGCTCGCGCAGCTGCGGCTCACGCATGCGTGGCCGGAGGTCGGCGAACAGAGTTTCGACTGCTCGCAAGGCAACGTGCAGCTCGTCTGCACGCAGCGCGTGAGCACCACGCCGAATCCGGTGTTCCGGCGCGTGCGGATCTCGGTGAGCATGCCCGGCCGCGCCGGCGTGCTCGCGCAGATGGTGACGGTGGTCGCGAATGAAACCAGCCGTCCGCTCTGA MRRRLPFPVSSARGFTMIEVLVALAIIAVALAASIRAVGTMATNASELHRRLLAGWSADNALAQLRLTHAWPEVGEQSFDCSQGNVQLVCTQRVSTTPNPVFRRVRISVSMPGRAGVLAQMVTVVANETSRPL TIGRFAM: general secretion pathway protein IPFAM: type II secretion system protein I/JKEGG: bcn:Bcen_0014 general secretion pathway protein I ; Unknown Class 3 GO:0015628 ; TIGR01707 gspI general secretion pathway protein I No data 3.9e-23 No data No data PF02501 GSPII_IJ, Bacterial type II secretion system protein I/J. The bacterial general secretion pathway (GSP) is involved in the export of proteins (also called the type II pathway). This Pfam family includes GSPI and GSPJ, which contain the pre-pilin signal sequence.. COG2165 PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0057 YP_833704 116688081 Protein 57946 57377 general secretion pathway protein H ATGCTCGCCATTCGCACGACCTCCCGCTGCGGCCGCGATTGCCGTGTGCGTCGCGGTGCGGTGCCGTTCGTACCGGCACGTACCGATGGCGGCCTGATGAAGCACGGCGCGGCACGACGTCGCACGCGCGGCTTCACGCTGCTCGAAATGCTGGTCGTGCTGGTGATCGCGGGGCTGCTCGTGTCGCTCGCGTCGCTGTCGCTGACGCGCAATCCGCGCACCGACCTGCGCGAGGAAGCGCAGCGTATCGCGCTGCTGTTCGAGACGGCCGGCGACGAAGCGCAGGTGCGCGCGCGGCCGATCGCGTGGCAGCCGACCGCGCACGGTTTCCAGTTCGACGTGAGCTCGCCCGACGGCTGGCGCACGCTGCGCGACGACCTGCTGCGCCCGCGCGACTGGGACGGCGGCGTCATCGGCGCCGACATCGATTATCCGGGGTCGGACACGCGCGCGAGCCGCGTCGTGTTCGGCACCGAGAGCATCGACACGCCGGTGCGCGTGACGCTGCATTCGGCCGCCGGCAGCGCGACGATCATCGGCACCGGCAACGGCCGCTACGAGGTGCAATGA MLAIRTTSRCGRDCRVRRGAVPFVPARTDGGLMKHGAARRRTRGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEAQRIALLFETAGDEAQVRARPIAWQPTAHGFQFDVSSPDGWRTLRDDLLRPRDWDGGVIGADIDYPGSDTRASRVVFGTESIDTPVRVTLHSAAGSATIIGTGNGRYEVQ TIGRFAM: general secretion pathway protein HKEGG: bcn:Bcen_0013 general secretion pathway protein H ; Cytoplasmic Class 3 GO:0015628 ; TIGR01708 typeII_sec_gspH general secretion pathway protein H equivalog 5.7e-27 Protein fate Protein and peptide secretion and trafficking COG2165 PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0058 YP_833705 116688082 Protein 58438 57986 general secretion pathway protein G ATGCAAACGTGGATCACTCGCCGCAACGCGGCCGTGCGTCGTCAGCGCGGTTTCACGCTGATCGAGATCATGGTGGTGGTCGCGATCCTCGGGATCCTGGCGGCGCTGATCGTGCCGAAGATCATGAGCCGCCCGGACGAGGCGCGCCGCATCGCCGCGAAGCAGGACATCGGCACGATCATGCAGGCGCTCAAGCTGTACCGTCTGGACAACGGCCGCTATCCGACCCAGGAGCAGGGCCTGAATTCGCTGATCCAGAAGCCGACCACCGATCCGATCCCGAACAACTGGAAGGACGGCGGCTATCTCGAGCGCCTGCCGAACGACCCGTGGGGCAACGGGTACAAGTACCTGAACCCGGGCGTGCACGGCGAGATCGACGTGTTCAGCTACGGCGCCGACGGCAAGGAAGGCGGCGACGGCAACGATACCGACATCGGTTCGTGGCAATAG MQTWITRRNAAVRRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRYPTQEQGLNSLIQKPTTDPIPNNWKDGGYLERLPNDPWGNGYKYLNPGVHGEIDVFSYGADGKEGGDGNDTDIGSWQ TIGRFAM: general secretion pathway protein GPFAM: type II secretion system protein GKEGG: bcn:Bcen_0012 general secretion pathway protein G ; Unknown Class 3 GO:0015628 ; TIGR01710 typeII_sec_gspG general secretion pathway protein G equivalog 1.2e-78 Protein fate Protein and peptide secretion and trafficking PF00114 Pilin, Pilin (bacterial filament). Proteins with only the short N-terminal methylation site are not separated from the noise.. COG2165 PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0059 YP_833706 116688083 Protein 58614 59024 hypothetical protein ATGAACGCGCTCTCGATCCGGATCCTTTCCCTCGCCCTCTTCGCGGGTTTGTGCGCGACGGCCACCTACTGGGTCGTCACGCTGTCCGCTCGCGAAGCGCCGCTGCCCGCCGCCGCCGCGCGGCTGCCGATCCGCACCGAGGACGCCGCCGCGCTCTTCGGCGGTCAGCTCGACAAGAATCCCGTCCAGGACATCCACCTGTTCGGCATTCTCGCGCTCGACCACGGCGGCGCCGCGATCGTCAGCGTCGGCGGCGAACCGCCGCGCGCCGTGTCGCTCGGCGCGGACGTCACGTCCGGCGCGAAGCTCGCCGAAGTGCGCCCGCGCTCGATCATCGTCGACCGCAACGGCGCCCGCGCCGAAATCCAGCTCCCGGCGAACACGCCGTCCCCCGCGATCTACATGCGCTGA MNALSIRILSLALFAGLCATATYWVVTLSAREAPLPAAAARLPIRTEDAAALFGGQLDKNPVQDIHLFGILALDHGGAAIVSVGGEPPRAVSLGADVTSGAKLAEVRPRSIIVDRNGARAEIQLPANTPSPAIYMR KEGG: bcn:Bcen_0011 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0060 YP_833707 116688084 Protein 60279 59062 general secretion pathway protein F ATGCCGGCATTCCGTTTCGAAGCAATCGATGCGGCGGGACGCGCGCAGAAAGGCGTGATCGATGCCGACAGTGCGCGCGCCGCGCGCGGCCAGCTGCGCACGCAGGGGCTCACGCCGCTCGTCGTCGAGCCGGCCGCCAGCGCGACGCGCGGCGCGCGTTCGCAGCGGCTCGCGTTCGGCCGCAAGCTGTCTCAGCGCGAACAGGCGATCCTCACGCGCCAGCTCGCGAGCCTGCTGATCGCGGGACTGCCGCTCGACGAGGCGCTCGGCGTGCTGACCGAGCAGGCCGAGCGCGACTACATCCGCGAACTGATGGCCGCGATCCGCGCGGAAGTGCTCGGCGGCCATTCGCTCGCGAACGCGCTCGGCCAGCATCCGCGCGATTTTCCGGAGATCTACCGCGCACTCGTTGCTGCGGGCGAGCACACCGGCAAGCTCGGCATCGTGCTGTCGCGCCTGGCCGACTACATCGAGCAGAGCAATGCGCTCAAGCAGAAGATCCTGCTGGCGTTCACGTATCCGGGCATCGTCACGCTGATCGCGTTCGGCATCGTCACGTTCCTGCTGAGCTACGTCGTGCCGCAGGTCGTCAACGTGTTCGCGAGCACGAAGCAGCAGCTGCCGATCCTCACGGTCGTGATGATGGCGCTGTCGGAATTCGTGCGGCACTGGTGGTGGGCGATCCTGATCGCGGTCGCGCTCATCGTGTGGTTCGTGAAGGCGACGCTGTCGCGCGCCGGGCCCCGGCTCGCGTTCGATCGCTGGGTGCTGACCGCGCCGCTCGCGGGCAAGCTCGTGCGCGGCTACAACACGGTGCGCTTCGCGAGCACGCTCGGCATTCTCACCGCGGCCGGCGTGCCGATCCTGCGCGCGTTGCAGGCGGCCGGCGAGACGCTGTCGAACCGCGCGATGCGCGCGAACATCGACGATGCGATCGTGCGCGTGCGCGAAGGCTCGGCGCTGTCGCGCGCGCTGAACAACGTGAAGACGTTTCCGCCGGTGCTCGTGCACCTGATTCGTTCGGGCGAGGCGACGGGCGACGTGACGACGATGCTGGATCGCGCGGCCGAAGGCGAAGCGCGCGAGCTGGAGCGCCGCACGATGTTCCTGACGAGCCTGCTGGAGCCGCTGCTGATCCTCGCGATGGGTGGCATCGTGCTCGTGATCGTGCTGGCCGTGATGCTGCCGATCATCGAGCTGAACAACATGGTGCAGTGA MPAFRFEAIDAAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFGRKLSQREQAILTRQLASLLIAGLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLANALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQSNALKQKILLAFTYPGIVTLIAFGIVTFLLSYVVPQVVNVFASTKQQLPILTVVMMALSEFVRHWWWAILIAVALIVWFVKATLSRAGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLSNRAMRANIDDAIVRVREGSALSRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIELNNMVQ TIGRFAM: general secretion pathway protein FPFAM: type II secretion system proteinKEGG: bcn:Bcen_0010 general secretion pathway protein F ; Cytoplasmic Membrane Class 3 GO:0015628 ; TIGR02120 GspF general secretion pathway protein F equivalog 5.4e-252 Protein fate Protein and peptide secretion and trafficking PF00482 GSPII_F, Bacterial type II secretion system protein F domain. The original family covered both the regions found by the current model. The splitting of the family has allowed the related FlaJ_arch (archaeal FlaJ family) to be merged with it.. COG1459 PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0061 YP_833708 116688085 Protein 61783 60284 general secretory pathway protein E GTGAGCGACGTGCTCGCGTCCTCCGCCCACGACGGCGCGCCGGGCGAACGCCAGCCGCCGTCGCCGCTCGCCGCGCGCCTGCTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCATCAGCTCGACGACACGCTCGAGGTATGGATCAGCGAACGCACGAGCGACGCCGCGCTCGCGGAGATCGCGCGCAACTTCGGCTCGATCGCCGTGCATCGCGTGCCGGCCGACGAGCTCGCACAGGCGATCAACCAGGCCTACGCACGCCAGGACGGCAGCGCCGCGCAGGTGGTCGGCGAGGTCGAAGGCGAAGTCGACCTGTCGCGGCTGATGCAGGACATTCCCGAAGTCGAGGATCTGCTCGAATCGGAAGACGATGCGCCGATCATCCGGATGATCAACGCGCTGCTCACGCAAGCGGCGCGCGAACAGGCATCGGACATTCACATCGAGCCATTCGAGAATGCGTCGGTCGTGCGCTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGATCAAGATCATGGCGCAGCTCGACATCGCGGAGAAGCGTCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGGCCGGTCGACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTCGAAAAGGATGCGCAGCGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTGATCGGCCGCCCGCACGGCATCGTGCTCGTCACCGGCCCGACCGGTTCGGGCAAGACGACCACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCAACATCATGACCGTCGAGGACCCGATCGAATACGACCTGTCCGGCATTGGCCAGACGCAGGTGAACGAGCGAATCGGGATGACCTTTGCCCGCGCGCTGCGCTCGATTCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTCGAAACCGCGCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTCGTGCTCGCGACGCTGCACACGAACGACGCGGCGTCCGCCGTCACGCGCCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGCCTGGTGCGCCAGCTCTGCCCGGTCTGCAAGGAAGAGCGGCATGAGGACGGCCGTACCGTATGGCATCCGGTCGGTTGCGCGAAGTGCGGACATTCCGGTTATGCGGGCCGGCGCGGTGTGTACGAGCTGCTGGTGATCGACGATTCGATCCGCTCGCTGATTCACCGCAACGCGGCCGATGCTGAAATTCTCGCCGCCGGCCGCGCGGAAGGCATGCGCACGCTGCGCGACGACGCCGAGCGCTGGCTCGCGTCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG MSDVLASSAHDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSIAVHRVPADELAQAINQAYARQDGSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRLNLEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRTVWHPVGCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAADAEILAAGRAEGMRTLRDDAERWLASGATSLEEVLRVTGGA KEGG: bcn:Bcen_0009 type II secretion system GspETIGRFAM: general secretory pathway protein EPFAM: type II secretion system protein ESMART: AAA ATPase ; Cytoplasmic Class 3 GO:0043107 ; TIGR01420 pilT_fam twitching motility protein subfamily 2e-26 Cellular processes Chemotaxis and motility PF00437 GSPII_E, Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection. . COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0062 YP_833709 116688086 Protein 64104 61780 general secretion pathway protein D ATGACAAGAAATCGCTTCGTTATGCGGCGTATCGCCACGACCCTGCTCGTGGCAGGCATCATCGTCTCGCAGGCCGCCTACGCTCAGGTCACGCTCAATTTCGTGAATGCGGATATCGACCAGGTCGCGAAAGCGATCGGCGCCGCGACCGGCAAGACCATCATCGTCGACCCCCGCGTGAAGGGGCAGCTCAATCTCGTGGCCGAACGGCCGGTGCCGGAAGACCAGGCATTGAAGACGCTGCAGTCGGCGCTGCGCATGCAGGGCTTCGCGCTCGTGCAGGATCACGGCGTGCTGAAGGTCGTGCCGGAAGCCGACGCGAAGCTGCAGGGCGTGCCGACCTACATCGGCAATGCGCCGCAGGCGCGCGGCGACCAGGTGATCACGCAGGTGTTCGAGCTGCACAACGAATCGGCGAACAACCTGCTGCCGGTGCTGCGGCCGCTGATCTCGCCGAACAACACGGTGACGGCCTACCCGGCGAACAACACGATCGTCGTGACCGACTATGCGGACAACGTGCGCCGCATCGCGCAGATCATCGCGGGCGTCGACAGCGCCGCGGGCGCGCAGGTGCAGGTCGTGCCGCTGCGCAACGCGAACGCGATCGACCTCGCCGCGCAACTGCAGAAAATGCTCGACCCGGGCGCGATCGGCAACAGCGACGCGACGCTGAAGGTATCGGTCACGGCCGACCCGCGCACCAACGCGCTGCTGCTGCGTGCGTCGAACGCGTCGCGCCTCGCGGCCGCGAAGCGTCTCGTGCAGCAGCTCGACGCGCCGAGCGCGGTGCCCGGCAACATGCATGTCGTGCCGCTGCGCAACGCCGATGCGGTGAAGCTCGCGAAGACGCTGCGCGGGATGCTCGGCAAGGGCGGCAACGACAGCGGCTCGTCGGCGTCGTCCAACGATGCGAACAGCTTCAACCAGAACGGCGGCTCGTCGTCGAGCGGCAACTTCTCGACCGGCACGTCGGGCACCCCGCCGCTGCCGTCGGGCGGCCTGGGCAGTTCGTCGTCGTCGTCCGGGTATGGCGGCGGCTCGTCCGGCGGTGGCCTCGGTACCGGCGGCCTGCTCGGCGGTGACAAGGACAAGAGCGGCGACGACAACCAGCCGGGCGGGATGATCCAGGCCGACTCGGCCACCAACTCGCTGATCATCACCGCGTCCGATCCGGTGTACCGGAACCTGCGCTCGGTGATCGACCAGCTCGACGCACGGCGTGCGCAGGTCTATATCGAAGCGCTGATCGTCGAGCTCAACTCGAATACGTCCGGCAACCTCGGCATCCAGTGGCAGGTGGCGAGCGGCCAGTTCCTCGGCGGTACGAACCTGAATCCCACGGGCGGTTTGGGCAACAGCATCATCAACCTGACGACGGGCGGCACGGCGGCCACCGCCGGGTTGGCCGCCAATCTCGCGAACCTGAACCAGGGCCTCAACATCGGCTGGTTGCACAACATGTTCGGCGTGCAGGGGCTCGGCGCGCTGCTGCAGTATTTTGCGGGCGTGAGCGACGCGAACGTGCTGTCGACGCCGAACCTGATCACGCTCGACAACGAGGAAGCGAAGATCGTCGTCGGCCAGAACGTGCCGATCGCGACCGGTTCGTATTCGAACCTGACGAGCGGCACGACGAGCAACGCGTTCAACACCTACGACCGTCGCGACGTCGGCCTGACGCTGCACGTGAAGCCGCAGATCACCGACGGCGGGATCCTGAAGCTGCAGCTCTATACCGAGGATTCGGCGGTCGTCGCCGGCACGACGAACGCGCAGACCGGCCCGACCTTCACGAAACGCTCGATCCAGTCGACGATCCTGGCCGACAACGGCGAGATCATCGTGCTCGGCGGCTTGATGCAGGACAACTACCAGGTGTCGAACAGCAAGGTGCCGCTGCTCGGCGACATCCCGTGGATTGGCCAGTTGTTCCGCTCCGAAACGAAGCAGCGCGCGAAAACCAACCTGATGGTGTTCCTGCGCCCGGTGATCATTTCCGATCGCAGCACCGCGCAGGCAGTCACCGCGAACCGCTACGACTACATCCAGGGCGTGACGGGCGCCTACAAGTCGGACAACAACGTGATGCGCGACAAGGACGACCCGGTCGTCCCGCCGATGCCGCTGGGTCCGAGCCAGGGCGGCACGCCGGCCGGCAATCTGTTCGATCTCGACAAGATGCGTCGCCAGCAGTTGCAGCGCCAGGTGGTGCCCGTGCCTGCCCAGCCATTGCCGGAAGCAACGCCCGCGCAGCCGCAAAGCGTGCCGCAGCAGGCGGTGCCGCAACAGCCGCTGACCACCGCGCCGGGAGCCTCGCAGTGA MTRNRFVMRRIATTLLVAGIIVSQAAYAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLVAERPVPEDQALKTLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYIGNAPQARGDQVITQVFELHNESANNLLPVLRPLISPNNTVTAYPANNTIVVTDYADNVRRIAQIIAGVDSAAGAQVQVVPLRNANAIDLAAQLQKMLDPGAIGNSDATLKVSVTADPRTNALLLRASNASRLAAAKRLVQQLDAPSAVPGNMHVVPLRNADAVKLAKTLRGMLGKGGNDSGSSASSNDANSFNQNGGSSSSGNFSTGTSGTPPLPSGGLGSSSSSSGYGGGSSGGGLGTGGLLGGDKDKSGDDNQPGGMIQADSATNSLIITASDPVYRNLRSVIDQLDARRAQVYIEALIVELNSNTSGNLGIQWQVASGQFLGGTNLNPTGGLGNSIINLTTGGTAATAGLAANLANLNQGLNIGWLHNMFGVQGLGALLQYFAGVSDANVLSTPNLITLDNEEAKIVVGQNVPIATGSYSNLTSGTTSNAFNTYDRRDVGLTLHVKPQITDGGILKLQLYTEDSAVVAGTTNAQTGPTFTKRSIQSTILADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSETKQRAKTNLMVFLRPVIISDRSTAQAVTANRYDYIQGVTGAYKSDNNVMRDKDDPVVPPMPLGPSQGGTPAGNLFDLDKMRRQQLQRQVVPVPAQPLPEATPAQPQSVPQQAVPQQPLTTAPGASQ TIGRFAM: general secretion pathway protein DPFAM: type II and III secretion system protein ; Outer Membrane Class 3 PF00263 Secretin_C, Bacterial type II and III secretion system protein.. COG1450 PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. Cell motility and secretion / Intracellular trafficking and secretion NC_008542 Chromosome1 Bcen2424_0063 YP_833710 116688087 Protein 64473 64967 Lytic transglycosylase, catalytic ATGAACAGACGGTTCGCTTCGATCGCGTTGATCGCCGCCGGCGCGTGGTTCGCCAGCGGCAACGCACGCGCCGACTGTTTCGACGAAGCGGCCAAATATCAGCAGGTCAATCCGCTGATCCTGCGCGCGATCGCGTGGCAGGAATCGCGCAACCGGCCCGAGGCGCTGAACAAGAACACGAACGGCTCGGTCGACTACGGCCTGATGCAGATCAATTCGATTCACCTGCCGACGCTGTCGCGCTACGGGATCGGCCGCGACACGCTGATGGAACCGTGCAAGAACGTGTACATCGCCGCGTGGCATCTCAAGCAGAAGATGAACCGCTACGGCAACACGTGGCAGGCGGTCGGCGCCTATCATTCGGAAACGCCGTCGCTGCGCGACAAGTACGCGCGGCAGATCGCCGGCATCCTGACGCAATGGAAGCTGCTGCCGCCCGCGCAGACCACTCAGGCCGCCCAGGCCGCTCAAGCGCCTCAAGCCGCTCAGTGA MNRRFASIALIAAGAWFASGNARADCFDEAAKYQQVNPLILRAIAWQESRNRPEALNKNTNGSVDYGLMQINSIHLPTLSRYGIGRDTLMEPCKNVYIAAWHLKQKMNRYGNTWQAVGAYHSETPSLRDKYARQIAGILTQWKLLPPAQTTQAAQAAQAPQAAQ PFAM: Lytic transglycosylase, catalyticKEGG: bcn:Bcen_0007 lytic transglycosylase, catalytic ; Unknown Class 3 PF01464 SLT, Transglycosylase SLT domain. This family is distantly related to pfam00062.. COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane]. Cell envelope biogenesis, outer membrane NC_008542 Chromosome1 Bcen2424_0064 YP_833711 116688088 Protein 65121 66434 cobalamin synthesis protein, P47K ATGAATCCGGCAATGAAACAGCCGTTGCCCGTCACCGTGCTGTCCGGCTTCCTCGGCGCCGGCAAGACCACGCTGCTCAACCACGTCCTCGCGAACCGCGCGGGCCTGAAAGTCGCGGTGATCGTCAACGATCTCGCGGCGGTCAACATCGACGCGTCGCTCGTGCGCGATGCGCAGGCGCTGTCGCACGTCGAGGAACGCCTCGTCGAAATGTCGAACGGCTGCATCTGCTGCACGCTGCGCGACGATCTGCTCGTCGAGATCCGCAACCTTGCGTCCGAAGGCCGCTTCGACGCGATCATGATCGAATCGACCGGTATCGCGGAGCCGATGCCGATCGCCGAAACCTTCACGTTCGTCGACGACGACGGCGCGTCGCTGTCAGCCATCGCGCGGCTCGACACGCTCGTCACCGTGGTCGACGCGTACAACTTCCTGCGCGACTACGGCTCCGACGACGCGCTCGCGACACGCGGCATCGCCGCGTCGGAAGACGACGACCGCACGCTCGTCGAGCTGCTGATCGAGCAGATCGAATTCTGCGACGTGCTGGTGATCAACAAGGCCGACCTCGTCGGCGCGGACGATCTCGCCCGCCTGCAGCACATCCTCGCGCGCCTCAATCCGCGCGCGCACCAGGTCGTCTCGACGTTCGGCAACGTGCCGCTCGACGAAGTGCTGAACACCGGCCGCTTCGATTTCGACGAAGCCGCGAACGCGCCGGGCTGGCTCGCATCGCTCGATCACGATCACACGCATTGCGACGACCCGGACTGCCATGACGACCATCATGCGCACGTGCACGGCGAAGCCGACGAATTCGGCATCGGCAATTTTGTTTACCGCGCGCGCCGGCCGTTTCACCCGGCACGGCTCTGGGCGCTGCTGCATCAGGAGTGGCCGGGCGTACTGCGCAGCAAGGGTTTCTTCTGGCTCGCGACGCGCAACGACATCGCAGGTTCGCTGTCGCAGGCGGGCGGCGTATGCCGGCATGGCCCGGCAGGTTTGTGGTGGGCGGCGCAGGATCGCGCGGAATGGCCGGACGACGACGAGCTGCTCGCTGAAATCCGCACCGAATGGCTCGGCGATCTCGACGATCGCACGGTCGGGGATCGTCGCCAGGAACTCGTGCTGATCGGCATCGCGCTCGACGCCGATGCATGGCGCGCGAAACTCGATGCATGCCTGCTGACCGATGCGGAGTTCGCACTCGGTGCGGCGGGATGGGCGGCGTTCGACGATCCGTTCCCGGCGTGGGACGTCGATTCGCACGACGACGACGATCACGGCGACACGCAGATCGTGCACGCATGA MNPAMKQPLPVTVLSGFLGAGKTTLLNHVLANRAGLKVAVIVNDLAAVNIDASLVRDAQALSHVEERLVEMSNGCICCTLRDDLLVEIRNLASEGRFDAIMIESTGIAEPMPIAETFTFVDDDGASLSAIARLDTLVTVVDAYNFLRDYGSDDALATRGIAASEDDDRTLVELLIEQIEFCDVLVINKADLVGADDLARLQHILARLNPRAHQVVSTFGNVPLDEVLNTGRFDFDEAANAPGWLASLDHDHTHCDDPDCHDDHHAHVHGEADEFGIGNFVYRARRPFHPARLWALLHQEWPGVLRSKGFFWLATRNDIAGSLSQAGGVCRHGPAGLWWAAQDRAEWPDDDELLAEIRTEWLGDLDDRTVGDRRQELVLIGIALDADAWRAKLDACLLTDAEFALGAAGWAAFDDPFPAWDVDSHDDDDHGDTQIVHA PFAM: cobalamin synthesis protein, P47K ; Unknown Class 3 TIGR02475 CobW cobalamin biosynthesis protein CobW No data 1.2e-14 No data No data PF02492 cobW, Cobalamin synthesis protein/P47K. This family of proteins contains P47K, a Pseudomonas chlororaphis protein needed for nitrile hydratase expression, and the cobW gene product, which may be involved in cobalamin biosynthesis in Pseudomonas denitrificans.. COG0523 COG0523, Putative GTPases (G3E family) [General function prediction only]. General function prediction only NC_008542 Chromosome1 Bcen2424_0065 YP_833712 116688089 Protein 66841 66563 histone family protein DNA-binding protein ATGAACAAACAGGAACTGATCGACGCCGTCGCCGCCCAAACGGGCGCCAGCAAGGCTCAAACCGGCGAAACGCTGGACACGCTGCTCGAAGTCATCAAGAAGGCCGTGTCGAAGGGTGATGCGGTTCAGCTGATCGGCTTCGGCAGCTTCGGTTCGGGCAAGCGCGCAGCACGTACGGGCCGCAACCCGAAGACGGGCGAAACCATCAAGATCCCGGCAGCCAAGACGGTCAAGTTCACGGCTGGCAAGGCGTTCAAGGACGCCGTCAACAAGCGTTAA MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDAVQLIGFGSFGSGKRAARTGRNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR PFAM: histone family protein DNA-binding proteinKEGG: bcn:Bcen_0005 histone-like DNA-binding protein ; Unknown Class 3 GO:0019047 ; TIGR00988 hip integration host factor, beta subunit equivalog 2.3e-16 DNA metabolism DNA replication, recombination, and repair PF00216 Bac_DNA_binding, Bacterial DNA-binding protein.. COG0776 HimA, Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair]. DNA replication, recombination, and repair NC_008542 Chromosome1 Bcen2424_0066 YP_833713 116688090 Protein 67230 69161 FAD dependent oxidoreductase ATGCCCGACCGACTTGTTTCCGCCACGCTCGCGCTTCGCGACGACGGCACGCTCGTCTCGCCCGAGTTCGGCGAGCTTCATCGCGGTGCATCCGGCACGCTCGCTCGCGCGCATCGCACGTTCGTCGCGGGCAACGGGCTGCCCGCGCGCTGGCAGCGCCGCCGAACGTTCACGATCGTCACGACCGCGTTCGGCGCGGGCGCCGGCTTCCTCGCGGCCTGGGCCGCGTGGCGCGACGATCCCGCGCGCTGCGAACGGCTGCACGTCGTCGCGGTCGAACCGCATCCGTTCTCGCGCGACGACCTGCACCGCGCGGTCTCGCATATGGTTGTAGACACAACCATATCGGCAGACGTCGACGCGTTGCTCGATGCCTGGCCGATACTCGTGCCGGGCCTGCACCGGCTCGAATTCGACGAAGGGCGCGTGGTGCTCACGCTCGCGTTCGGCGATACGATCGACTTGTTGAAGAAGCTCGTCGCGCGCGCCGATGCGTTTTTTCTCGACGGCGCCGCGGCATCGGGCGACGGGATTCGCGCACTCGCGAAACTCGCCGGCGAACACGCGACGTTTGCGACGCATGCAAAGTCCGACGACGTGAAACACGCGCTCGGCGAAACAGGTTTCACGTTCCGCGAAGTCGACGATCGCCTCGTCGGCGACTATGCGCCGCGCTGGCGCGCGCGCCGGCACGAGCCGCCGCGTGCGCTGCCCGTTGCCGCGCGCCGCGCGATCGTGATCGGCGCGGGTCTCGCCGGCTGCGCGGTGGTCGAACGGCTGGCCGCGCGCGGCTGGGACGTCACGCTGATCGAACGGCACGAACGGATCGCGAGCGAAGCGTCGGGCAATCCGGCCGGTGTGTTCCATCCATTGATGACGCGCGATGACAACGTCGCGAGCCGGCTCACGCGCGGCGGCTTCCTGCACGCGCTCGCACGCTGGCGTGCGCTCGAACGCGCGGGGCATGCATTCTCACGCAGCACGCACGGGATGCTCCATCTCGCCGAATCGGCCGACGATTTCGCGCGGATGCGCGACGCGTTCGACGCGTTCGGGCCGCCGTCCGACTATGCAACGCTGCTCGATGCCGATGCCGCGCGGGCGCACCTGAATCTGCCGGTCGCGCAGGGCGGCCTGCTGTTTCCGCACGGCGGCGCCGTGTGGCCGGCCGGGCTGTGCGTCGCGCAGTATGCGGCGGCCGGCGAGCGCGTGCGGCTGCTGGCGTCCACCTGCGTCGCACGGCTCGAACGGCGGGACGACACCTGGCATGCACTCGACGATACCGGCGCCACGCTGGCCGATGCGCCCGTCGTCGTGCTCGCGAACGCGGGCGACGCCGCGCGTCTTGCCGGGCTGCGGCACGTCACGCTGCAACCGGTGCGCGGCCAGCTCACGCTGTTGCCGCCGGGCACGACGGCGCCGCTGCCGTGCCCGGCGATCGGCGACGGTTACGCGGTCCCGCTCGACGACGGCACGCTGCTGATCGGCGCCACCTTCGAACCGGACGACACCGATCCCGCGATGCGCGCGGCCGGCCACGCCGAAAACCTCGATCGCGTGCGGCACCTGCTGCCGGGCCTGATCGGCGCGCTGCCGGATCCCGCCACGCTGCGCGGGCGCGTCGCATTCCGCTGGGTCGTCGGCGACCGCCTGCCGCTCATCGGCCCGCTCGCCGACGAAACGCAGGCCACCGCGAACGCACGCGCGCTGGGCGGTGCGCAGGCGCGCGACCTGCCGCGCATGCCGGGCCTCTACGGCGCCTTCGGCTTCGGTTCGCGCGGCCTCGTGTGGGCCGCGCTCGGCGCCGAACTCATCGCATCGCAACTCGAAGGCGAGCCCTGGCCGCTCGAGCGCGAACTCGCCGACGCCGTCGATCCCGCCCGCTTCCTGATCCGCGCACTGCGCGCCCGCCGCGTCGGCTCGGCGGGCTGA MPDRLVSATLALRDDGTLVSPEFGELHRGASGTLARAHRTFVAGNGLPARWQRRRTFTIVTTAFGAGAGFLAAWAAWRDDPARCERLHVVAVEPHPFSRDDLHRAVSHMVVDTTISADVDALLDAWPILVPGLHRLEFDEGRVVLTLAFGDTIDLLKKLVARADAFFLDGAAASGDGIRALAKLAGEHATFATHAKSDDVKHALGETGFTFREVDDRLVGDYAPRWRARRHEPPRALPVAARRAIVIGAGLAGCAVVERLAARGWDVTLIERHERIASEASGNPAGVFHPLMTRDDNVASRLTRGGFLHALARWRALERAGHAFSRSTHGMLHLAESADDFARMRDAFDAFGPPSDYATLLDADAARAHLNLPVAQGGLLFPHGGAVWPAGLCVAQYAAAGERVRLLASTCVARLERRDDTWHALDDTGATLADAPVVVLANAGDAARLAGLRHVTLQPVRGQLTLLPPGTTAPLPCPAIGDGYAVPLDDGTLLIGATFEPDDTDPAMRAAGHAENLDRVRHLLPGLIGALPDPATLRGRVAFRWVVGDRLPLIGPLADETQATANARALGGAQARDLPRMPGLYGAFGFGSRGLVWAALGAELIASQLEGEPWPLERELADAVDPARFLIRALRARRVGSAG PFAM: FAD dependent oxidoreductase ; Cytoplasmic Class 3 GO:0016647 ; TIGR02352 thiamin_ThiO glycine oxidase ThiO equivalog 5.2e-11 1.4.3.19 Biosynthesis of cofactors, prosthetic groups, and carriers Thiamine PF05430 DUF752, Protein of unknown function (DUF752). This family contains several uncharacterised bacterial proteins with no known function.. COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]. Amino acid transport and metabolism NC_008542 Chromosome1 Bcen2424_0067 YP_833714 116688091 Protein 69463 69789 hypothetical protein TTGAAACCAAAGACCTGTGGCGCCGCACAGCGCCGCGAGTCGATTCAGTCGGTTCCGGAACGAAAAAGCTGTGGCACAATCGGTTTCCTTCGCGTTCGTTCGGCCAAGCGCCGGACATGCTTCAACGGAACGGTCGGCACGATTTCGAATCTGAATCTTCGAGACTGCGCAGTCCGTTCACACACCAGGCCGACAATCCAGATCGGCAACCTGAACGACGTTCCGCCCTGTGGCGGAACAGGCGGACCCCATGTACCGCCATCGTCGAGCACAACAATCACATTCGGGGCGATACCCAGCCGGCGCGCATCCATTCCTGTCGCTTGA MKPKTCGAAQRRESIQSVPERKSCGTIGFLRVRSAKRRTCFNGTVGTISNLNLRDCAVRSHTRPTIQIGNLNDVPPCGGTGGPHVPPSSSTTITFGAIPSRRASIPVA KEGG: bcn:Bcen_0003 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0068 YP_833715 116688092 Protein 69833 71047 sodium/hydrogen exchanger ATGAAGTCGGCGTTCTCATTCCTGCCCAACTGGCCGCTCGCGCCGGATGCCGTGTTCTGGGCCGGGCTCGCACTGTTTGCAGCCGGCCTGTGCGGCGAGCTGTGCTATCGCGCGTGGCGCTTGCCGCGCATCACCGGCTATGCCGTGATCGGCCTGATCGCCGGTTCGTTCGGATTCGGCGTGATCGACACGAGCACCGACGAAACCTCGCGACTGTTGATGGACGTCGCGCTCGGTCTGCTGCTGTTCGAGCTCGGCAGCCGCCTCGACCTGCGCTGGATTCGGCGCAATCCGTGGCTCGTCGCGTCGAGCCTCGCGGAAGCCACGCTAACCTTCGTGCTCGTGCTGTTCGTGATGCTCGCGCTCGGCGTATCGGGGATGGTCGCCCTCGTGCTGTCGGCGATCGCGATCGCGACGTCGCCGTCGATGGTGATCCAGCTCAAGACCGAACTGCGTGCGGAAGGGCAGGTGTCGCAGCGCCTGATCACGCTCACCGCGCTCAACAGCGTGTATGCGATCGTGCTGACCAAGCTCGTGACGAGCTGGCTGCACCAGGAAGCGTACGGCAACGTTTTCGCGACGATCCTGCAGCCGCTCTACCTGCTCGCCGGTTCGTTCATCGTCGCGTATCTGGTCGCGCGTTCGTGCAATTACCTGTTCCGTCACATGACCGCGACGATGCGCGACGAGCATTCATTCGTCGCGCTGTTCGGGCTCGTGATGCTCGCGATCGCCGTCGCGCAGGCGCTGAAGCTGTCGACGCTGCTCACGCTGCTGCTCGCCGGCATCATCGTGAAGAACCTCGAAGCGCGGCCGCAGCTGTGGCCCGAGCACTTCGGCACGGCCGGCTGGCTGCTGACGGTGGTGCTGTTCGTGCTGACGCTCACGTCGTTCACGTGGGGCGACATCGCGCTCGGCGGGCTGCTCGCGATCGTGCTGATCGTCACGCGGCTCGTCGCGAAGCTGGCCGGCGTCGTCGCGTTCGCGAAGCCGAGCGGCCTCGGGATGAAGCAGGGCGTCGCGCTCGGCATCGCGCTCACGCCGATGTCCGCGCTGTCGTACCTGCTCGTCGACGATACCTACCAGCTCTATCCCAATTTCGACCCGCACCTGCGCGCGATCGTGATGTGCTCGATCGTGATCCTGCAGCTCGTCAGCCCGTTCGTCGTCTATCGCTGCCTGTCGGCGGTCGGCGAACGCAGCGACAGCAACTGA MKSAFSFLPNWPLAPDAVFWAGLALFAAGLCGELCYRAWRLPRITGYAVIGLIAGSFGFGVIDTSTDETSRLLMDVALGLLLFELGSRLDLRWIRRNPWLVASSLAEATLTFVLVLFVMLALGVSGMVALVLSAIAIATSPSMVIQLKTELRAEGQVSQRLITLTALNSVYAIVLTKLVTSWLHQEAYGNVFATILQPLYLLAGSFIVAYLVARSCNYLFRHMTATMRDEHSFVALFGLVMLAIAVAQALKLSTLLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVVLFVLTLTSFTWGDIALGGLLAIVLIVTRLVAKLAGVVAFAKPSGLGMKQGVALGIALTPMSALSYLLVDDTYQLYPNFDPHLRAIVMCSIVILQLVSPFVVYRCLSAVGERSDSN PFAM: sodium/hydrogen exchangerKEGG: bcn:Bcen_0002 sodium/hydrogen exchanger ; Cytoplasmic Membrane Class 3 PF00999 Na_H_Exchanger, Sodium/hydrogen exchanger family. Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.. COG0475 KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]. Inorganic ion transport and metabolism NC_008542 Chromosome1 Bcen2424_0069 YP_833716 116688093 Protein 71062 72177 uncharacterized enzyme ATGGCACTCGAAACCTTCGTCAATTCCGAACCGTTCACGTTCGGCGTCGAACTGGAGATCCAGGTCGTCAACACGCACAACTACGACCTGACCAAAGCGGCATCCGACCTGATGCGCCTGATCCAGGGCGAGACCTTTCCGGGCAACATCACGCCGGAAATCACCGAAAGCATGATCGAACTGTCGACCGGCATCTGCCATTCGCACGAGCAGGCCGTCAGCGAGCTGCATGCGATCCGCGACGTGCTCGTGAAGGCGGCCGACCAGCTCAACGTCGGGCTGGCCGGCGGCGGCACGCATGCGTTCCAGCAATGGAGCGACCGGCAGATCTACGATGCGCCGCGCTTCCAGTACATTTCCGAGCTGTACGGCTATCTCGCCAAGCAGTTCACCGTGTTCGGCCAGCACGTGCACATCGGCTGTCCCGATCCCGACAGCGCGCTGTTCCTGCTGCACTCGATGTCGCGCTTCATTCCGCACTTCATCGCGCTGTCGGCGTCGTCGCCGTTCGTGCAGAACGTCGACACAGGCTTCCATTCGGCACGCCTGAATTCGGTGTTCGCGTTCCCGTTGTCGGGCCGTGCGCCGTTCGTGCTCACCTGGGACAGCTTCGAGGAATACTTCACGAAGATGGTGAACACGGGCGTCGTCAACTCGATGAAGGACTTCTACTGGGACATCCGGCCGAAGCCCGGCTACGGCACGATCGAGGTGCGCGTGATGGACACGCCGCTGTCGGTCGATCGCGCGGCGGCGATCGCCTGCTACATCCAGACGCTCGCACGCTACCTGCTGACCGACCGGCCGCTGAAGCTGTCGGAGGACGATTACCTCGTCTACACGTTCAACCGTTTCGAAGCGTGCCGCTTCGGGCTCGAAGGCACCTGTGTGAATCCTCAGACGGGCGAGCGTCGCACGATCGCGGAAGACATCCTCGACACGCTCGACCGGATCGCGCCGCATGCGGCCGCGCTCGGCTCGCGCGCGGCGCTCGACGAGATCGGCGCGCTCGCGAAGGCGCGCGTGAACGACGCATCGTGGTTGAGAACCGTTTTCAAACAGGAAAAATCGCTGAACGAGACGGTCCGGCAGCAGTGCTTACGTTGGCGCGAGTGA MALETFVNSEPFTFGVELEIQVVNTHNYDLTKAASDLMRLIQGETFPGNITPEITESMIELSTGICHSHEQAVSELHAIRDVLVKAADQLNVGLAGGGTHAFQQWSDRQIYDAPRFQYISELYGYLAKQFTVFGQHVHIGCPDPDSALFLLHSMSRFIPHFIALSASSPFVQNVDTGFHSARLNSVFAFPLSGRAPFVLTWDSFEEYFTKMVNTGVVNSMKDFYWDIRPKPGYGTIEVRVMDTPLSVDRAAAIACYIQTLARYLLTDRPLKLSEDDYLVYTFNRFEACRFGLEGTCVNPQTGERRTIAEDILDTLDRIAPHAAALGSRAALDEIGALAKARVNDASWLRTVFKQEKSLNETVRQQCLRWRE TIGRFAM: uncharacterized enzymePFAM: glutamate--cysteine ligase, GCS2KEGG: bcn:Bcen_0001 enzymatic protein of unknown function ; Cytoplasmic Class 3 TIGR02050 gshA_cyan_rel uncharacterized enzyme No data 1.4e-135 No data No data PF04107 GCS2, Glutamate-cysteine ligase family 2(GCS2). Also known as gamma-glutamylcysteine synthetase and gamma-ECS (EC:6.3.2.2). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.. COG2170 COG2170, Uncharacterized conserved protein [Function unknown]. Function unknown NC_008542 Chromosome1 Bcen2424_0070 YP_833717 116688094 Protein 72682 73320 transcriptional regulator, MarR family ATGAGCGAAGGCGTTTACGGGAACCAGGCTGCGGGACGTGTGACCCACAGCCTGCTGCGGTTGAGCACGGCCATGCGGAGCGAGGCATGGGATTGGGCGGAAGGCGCTGGCCTCACGCCGACGCAGGGCGAGATTCTCGTGCTGCTGCTGCAGCGCAAGGGCCCGATGCGGCTCGGCGAGATCGCGCGCGAGACGCAGCTCACCGCGGCCACCACGAGCGATGCGGTCAGCACGCTCGAGACGAAGGGGCTCGTCGAGAAGCGCCGTGCGCTGGACGACGGCCGGGCACTGGCCGTACGCTTGTCGGCGCGTGGCCGCACGGCCGCGAAGAAGGCGCTGCAATGGCCTGAATTCCTGACGAAAGCGGTCGGCAAGCTCGGCGCGGACGAGCAGGGCACGCTGTATCGCGCGCTGCTGAAGACGCTGCGCGAGCTGCAGGTGGCCGGCGCGACGCCGCCGCAACGCATGTGTCTCACGTGCACGCATTTCCAGCCGAGCAAGCCGTCGAAAAAGACCGTGCATCACTGCGCGGTGCTCGACATCGCGATGTCGGACAGCGATCTGCGTCTCGACTGCTCGGTGCAGGAAGAAGCCGACGCGGCGACGCAGAAGAAGACCTGGAAGATTTTCGCAGGCTGA MSEGVYGNQAAGRVTHSLLRLSTAMRSEAWDWAEGAGLTPTQGEILVLLLQRKGPMRLGEIARETQLTAATTSDAVSTLETKGLVEKRRALDDGRALAVRLSARGRTAAKKALQWPEFLTKAVGKLGADEQGTLYRALLKTLRELQVAGATPPQRMCLTCTHFQPSKPSKKTVHHCAVLDIAMSDSDLRLDCSVQEEADAATQKKTWKIFAG PFAM: regulatory protein, MarR ; Unknown Class 3 PF01047 MarR, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.. COG1846 MarR, Transcriptional regulators [Transcription]. Transcription NC_008542 Chromosome1 Bcen2424_0071 YP_833718 116688095 Protein 73349 74059 glutamine amidotransferase class-I ATGAACGCTGAAGTCGTGGCGATCCGCCACGTGCATTTCGAGGATCTCGGGAGCTTCGAGCAGGTGCTCGGCGAACGCGGTCGGCGGGTGCGCTATGTCGATGTCGGATCGTCGCGGGTCGAGGTGCTCGACGTGCTCGAGCCGTCGCTGCTCGTCGTGCTCGGCGGGCCGCTCAGCGTGTACGACGACGCGCAGTATCCGACGATCGCGCCGCTCCTGGCGCTCGTGCGCCAGCGCATCGACGCGGGGCTGCCGATCCTCGGCATCTGCCTCGGCGCGCAGTTCATCGCACGGGCGCTCGGGGCGCGCGTCTACCCGGCCGCGCAGCACGAACTCGGCTGGGCGCCGCTGACGCTCACCGACGCCGGCCGTGCGTCGTCGCTGCGTCATCTCGACGGCGCGACGACGTCGATGCTGCACTGGCATGGCGATACGTTCGACCTGCCGGGCGGTGCGATCCATCTCGCGTCGACGCCGGCCTGTCGCCACCAGGCCTTCGCGTGGGGGCAGCACGTGCTGGCGCTGCAATGTCATCCCGAAATCCGTACCGATCGCTTCGAACCGTGGCTGATCGCGAATGCCGGCGAAATCGCGGCGACGCCAGGCGTCGACGCGCGCCAGTTGCGGGCCGATACCATTCAGCACGGCCCCGCGCTCGAGACGGCCGCCCGCCACATGTTCGCGGAGTGGCTCGGCGGCGTCGGGCTCTGA MNAEVVAIRHVHFEDLGSFEQVLGERGRRVRYVDVGSSRVEVLDVLEPSLLVVLGGPLSVYDDAQYPTIAPLLALVRQRIDAGLPILGICLGAQFIARALGARVYPAAQHELGWAPLTLTDAGRASSLRHLDGATTSMLHWHGDTFDLPGGAIHLASTPACRHQAFAWGQHVLALQCHPEIRTDRFEPWLIANAGEIAATPGVDARQLRADTIQHGPALETAARHMFAEWLGGVGL PFAM: glutamine amidotransferase class-IKEGG: bcn:Bcen_2984 glutamine amidotransferase class-I ; Cytoplasmic Class 3 GO:0006177 ; TIGR00888 guaA_Nterm GMP synthase, N-terminal domain equivalog_domain 1.3e-09 6.3.5.2 Purines, pyrimidines, nucleosides, and nucleotides Purine ribonucleotide biosynthesis PF00117 GATase, Glutamine amidotransferase class-I.. COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]. Nucleotide transport and metabolism NC_008542 Chromosome1 Bcen2424_0072 YP_833719 116688096 Protein 74288 75400 NADH:flavin oxidoreductase/NADH oxidase ATGACTGCGCTGTTTTCCCCGTTCACGCTGCGCGGCGTGACCCTTCCGAACCGGATCGTGATTTCCCCGATGTGCCAGTACTCGGCCGAACGCGGCGAAGCGACCGACTGGCACATGATTCACCTCGGCCATCTCGCGCTGTCGGGCGCTGGGCTGCTGTGCATCGAGGCGACCGCGGTGGAGCCCGACGGGCGCATCACGCATGGCGACCTCGGTCTGTGGGACGACGTGACCGAAGCCGCGCTGAAGCCGGTGCTGGCCGCGATCCGCAAGCATTCGCCGATCCGCGTCGCGATGCAGCTGTCGCACGCGGGCCGCAAGGCGTCGAGCGCGGCGCCGTGGGAGGGCGGCCAGCTCGTGCCGGTCGCCGACGGCGGCTGGCTGCCGCACGGGCCGTCGGCCGTGCCGCACAAGGACGGCGAGACGCCGCCGCTCGCGCTCGATGCGGCGGGCCTGAACCGCATCCGCGAAGCCTTTGCCGCATCGGCCAGGCGTGCCGCACGGCTCGGCATCGATGCGATCGAAGTGCACGCGGCGCACGGCTACCTGCTGCATCAGTTCCTGTCGCCGCTCGCGAACCGGCGCACCGACGAATACGGCGGCTCGCGCGAAAACCGGATGCGGTTTCCGCTCGAGATCTTCGAGATCGTGCGTGCCGCGTTTCCGGAAGACCGGCCGGTCGGCGTGCGCGTGTCCGCGACCGACTGGGTCGAAGGCGGCTGGGAACTCGACGATACGATCGCGTTCGCACATGAACTGAAGCGCCGCGGCTGTGACTGGATCGACGTGTCGTCCGGCGGCGTGTCGCCGCTGCAGAAGATTCCGCTGTCGCCCGGCTACCAGGTGCCGTTCGCGCAGGCCGTGAAGCGGTCGGTCGGCATGCCGACGATCGCGGTCGGCCTGATCAACGAACCCGCGCACGCGAACCGGCTGATCGAGGCCGGCGATGCCGATTTCGTCGCGATGGCGCGCGCGATGCTGTACGACCCGCGCTGGCCGTGGCACGCGGCGGCCGAACTCGGCGCGCAGGTGACGGCGCCGCCGCAGTACTGGCGTTCGCAGCCGCGTGAGCACAAGGCGCTGTTCGGCGACGTCTCGTTCGGCCAGCGCTGA MTALFSPFTLRGVTLPNRIVISPMCQYSAERGEATDWHMIHLGHLALSGAGLLCIEATAVEPDGRITHGDLGLWDDVTEAALKPVLAAIRKHSPIRVAMQLSHAGRKASSAAPWEGGQLVPVADGGWLPHGPSAVPHKDGETPPLALDAAGLNRIREAFAASARRAARLGIDAIEVHAAHGYLLHQFLSPLANRRTDEYGGSRENRMRFPLEIFEIVRAAFPEDRPVGVRVSATDWVEGGWELDDTIAFAHELKRRGCDWIDVSSGGVSPLQKIPLSPGYQVPFAQAVKRSVGMPTIAVGLINEPAHANRLIEAGDADFVAMARAMLYDPRWPWHAAAELGAQVTAPPQYWRSQPREHKALFGDVSFGQR PFAM: NADH:flavin oxidoreductase/NADH oxidaseKEGG: bcn:Bcen_2983 NADH:flavin oxidoreductase/NADH oxidase ; Unknown Class 3 PF00724 Oxidored_FMN, NADH:flavin oxidoreductase / NADH oxidase family.. COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]. Energy production and conversion NC_008542 Chromosome1 Bcen2424_0073 YP_833720 116688097 Protein 75578 76108 nuclear protein SET ATGAGTTCACGCAGGATCGCGGTGCGCCGCTCGGGAGTACACGGCAAGGGCGTGTTCGCCGTGGCGCCGATCAAGGCCGGCGAGCGCGTAGTGGAATACAAGGGCGAACGAATCTCGTGGAAGGAAGCGCTGCGCCGACATCCGCACGACCCGAGCGAGCCGAACCATACGTTCTACTTCGCACTGGACGAAGGCGGCGTGATCGACGGCAAGATCGACGGCAACAGCGCGCGCTGGATCAACCATTCGTGCGCGCCGAACTGCGAAGCCGAGGAAGTCAAAGGCCGCGTGTACATCCACGCGCTGCGCGACATCGGGCCGGAAGAGGAGCTGTTCTACGACTACGGCCTCGTGATCGACGCGAAGCTGACGAAGAAGCTCAAGCGCGAATACGCGTGCCACTGCGGGGCGGAGTCGTGCCGCGGCACGTTGCTCGCGACGTCCGACGAAGGCGGGAAGAAGAAAAAGAAGAAGGACAAGAAGGACGGCAAGCCGGCGTCCGGTTCGAAGGACAAGAAGAACAAGAAGTGA MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWINHSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVIDAKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDKKDGKPASGSKDKKNKK PFAM: nuclear protein SETKEGG: bcn:Bcen_2982 nuclear protein SET ; Unknown Class 3 PF00856 SET, SET domain. SET domains are protein lysine methyltransferase enzymes. SET domains appear to be protein-protein interaction domains. It has been demonstrated that SET domains mediate interactions with a family of proteins that display similarity with dual-specificity phosphatases (dsPTPases). A subset of SET domains have been called PR domains. These domains are divergent in sequence from other SET domains, but also appear to mediate protein-protein interaction.. COG2940 COG2940, Proteins containing SET domain [General function prediction only]. General function prediction only NC_008542 Chromosome1 Bcen2424_0074 YP_833721 116688098 Protein 77754 76270 periplasmic sensor signal transduction histidine kinase ATGTCTCCTGATCCGGCTGTGACCACCAGCCTGCGCCGCTCGCTGCTCCGGCGCCTCGCCGCCCCGCTGTCGATGCTCGCGCTGATGAGCGGCCTGATCGCCTACTGGCTCGCGTGGCAATACACGCAGCACGTGATCGACCGCTCGCTCGCCGATCTCGCGACCGCCATCTCCAAACAGATCCAGATCGCCGGCCCCGACGCGCCGTTCACGGTGCCGCCGCTCGCACAGGCGATGTTCTCCGATCCGGCCGAAGCGCTGATCTACCGGATCAGCGACGGCGAGCAGGAACTCGCCGGCGACCCGAAGCTGCCGCTGCAGGGCATCAACGTGCGCCGCATGCATCACGCGTACGTGTTCGAGGCCGAGTACGACAACCGCGCGGTGCGGGTCGCGCAGGTGCGCGTCGACGACGTCGAGGGCGGCAAGCCGATGGTCGTCGAAGTCGCGCAGCCGGTGCGGCACCGCTACCGGATCGCGGCTGAATTCCTCGTTGCGATCATGATGCCGCTGCTCCTGCTGCTGCTCGCCGGCTGGGGCATCGTGTGGCGCGTGGTGAACCAGCAGCTCGGCCCGCTCACGCATCTCGCCGATTCGCTGAACCGGCAGACCCACACGTCGCTGGAGCCGGTCGACGAAACCGACGTGCCGCTGGAGATCCGGCCGCTGACGAGCGCGATGAACGCGCTGCTCGGCCGCCTCAAGACCGCGCTCGACGCGCAGCGCAAGTTCATCGCCGATGCCGCTCACCAGTTGCGCACGCCGCTCACCGCGGTGAAGCTACATGCCGAGCAGGCGGCCGTCGCGCGCGACCCGCACCAGACCTTCGCCGCGGTGCGTGAGCTGCGCGCAGCGGCCGACCGGGCGGTGCGGCTGTCCAACCAGTTGCTGTCGCTCGCGCGGGCCGAGCCGGGCGAGCAGGCCGCGCGCTTCGTCGACGTCGATCTCGCGGCGATGGCGTTCGAGACCGGCGCCGAATGGGTGCCGCGCGCGCTCGCGTCGCATGTCGACCTCGGCTTCCAGCGCAGCGACGAGCCGGGCGACGACGAGAAGCTGATCGTACGCGGCAACCCCGTGCTGTTGCGCGAGGTGATCGCGAACCTGCTCGACAATGCGCTGAAGTACGTGCCGCTCGCGCGGCCGGACGGCGCGCGGATCACGGTGAACGTCGCGCGCGCCTCGCTCGAGGGCAGCCAGCCGGCCGCCGAGATCGTCGTCGAGGACAACGGCCCCGGCGTGCCCGCGAACCAGCAGGCCGACCTGTTCAAGCGCTTCTTCCGCGGCGACGCGCAAAGCGGCAATGGTGTCGAGACGGGCGCCGGGCTCGGGCTCGCCATCGTGCACGACATCATCGCGATGCATGGCGGCACCGTGTCGTACGAGGATGCATCGGAAGGCGGCTCGCGCTTCGTGGTGAGGGTACCGCTCGCCGCGCATACGGAGCGGCCGGCCAGCGAAACGCCGGCTGCGGCGCCGACGCACTGA MSPDPAVTTSLRRSLLRRLAAPLSMLALMSGLIAYWLAWQYTQHVIDRSLADLATAISKQIQIAGPDAPFTVPPLAQAMFSDPAEALIYRISDGEQELAGDPKLPLQGINVRRMHHAYVFEAEYDNRAVRVAQVRVDDVEGGKPMVVEVAQPVRHRYRIAAEFLVAIMMPLLLLLLAGWGIVWRVVNQQLGPLTHLADSLNRQTHTSLEPVDETDVPLEIRPLTSAMNALLGRLKTALDAQRKFIADAAHQLRTPLTAVKLHAEQAAVARDPHQTFAAVRELRAAADRAVRLSNQLLSLARAEPGEQAARFVDVDLAAMAFETGAEWVPRALASHVDLGFQRSDEPGDDEKLIVRGNPVLLREVIANLLDNALKYVPLARPDGARITVNVARASLEGSQPAAEIVVEDNGPGVPANQQADLFKRFFRGDAQSGNGVETGAGLGLAIVHDIIAMHGGTVSYEDASEGGSRFVVRVPLAAHTERPASETPAAAPTH PFAM: ATP-binding region, ATPase domain protein domain protein ; Cytoplasmic Membrane Class 3 TIGR01386 cztS_silS_copS heavy metal sensor kinase No data 2.1e-16 No data No data PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.. COG0642 BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]. Signal transduction mechanisms NC_008542 Chromosome1 Bcen2424_0075 YP_833722 116688099 Protein 78568 77876 two component transcriptional regulator, winged helix family ATGCGACTCCTTCTGATCGAAGACGACCGCCCCATCGCACGCGGTATCCAGAGCAGCCTCGAACAGGCTGGCTTCACCGTCGACATGGTGCATGACGGCATTTTTGCCGAACAGGCGCTGGCACAGAACCGCCACGAACTCGTGATCCTCGACCTCGGCCTGCCGGGCATCGACGGGATGACGCTGCTCACGCGCTTTCGCCAGACCAACCGCCACACGCCCGTGATCGTGCTGACCGCGCGCGACGAGCTGAACGACCGGATCCAGGGCCTGAACTCCGGCGCCGACGACTACATGCTCAAGCCGTTCGAGCCGGCCGAGCTCGAAGCGCGCATCCGCGCGGTGATGCGCCGCAGCGGCCCGCACAGCGACATGCCGCGTCCGGAAGTGTCGCTCGGCGGCGTCCGCCTGTCGGGCGTCGACCGCCGCATCTTCAACGACGACAAGCCGCTCGAACTGTCGCCGCGCGAATTCGCGGTGCTGGAAATGCTGCTGCTGCGTCACGGCCGCGTCGTCAGCAAGGCCCAGTTGCAGGATCACCTCACGCACTTCGGCGGCGATCTTGGCGACACCGCGATCGAAGTCTACGTGCACCGCGTGCGCAAGAAACTCGAGCAATGCCGGGTCGAAATCGTCACGGTGCGCGGCTTCGGCTACCTGCTGCAGGAAATCCGCCAGACGGCGAGCGTCTGA MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGMTLLTRFRQTNRHTPVIVLTARDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSGPHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAVLEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV PFAM: response regulator receiver ; Cytoplasmic Class 3 TIGR01387 cztR_silR_copR heavy metal response regulator No data 2.7e-31 No data No data PF00072 Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.. COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]. Signal transduction mechanisms / Transcription NC_008542 Chromosome1 Bcen2424_0076 YP_833723 116688100 Protein 78661 78921 hypothetical protein ATGGCGGCCAGCGAACGATTAAATCTAATCATGTCCGATATTTCGATCCACGACCTCGAAGCCGCGATCAATTTCTGGCGCGCCCGCTCGCCGTCGAGCGGCGACGAACTCAAACTCTGCGAAGAGGCCAGCGCGCTCTCCAAGCCGTATGCGCTGCTGATTGTACAGCGCGAAAGCGCGCTGCAACTGGAAGGATTGGACCCCAAGGCGCGGAAAGCGTACGAGACTTACGTGCGCCTTAAGGATGGCTTGGAAAGCTGA MAASERLNLIMSDISIHDLEAAINFWRARSPSSGDELKLCEEASALSKPYALLIVQRESALQLEGLDPKARKAYETYVRLKDGLES KEGG: bcn:Bcen_2979 hypothetical protein ; Unknown Class 3 NC_008542 Chromosome1 Bcen2424_0077 YP_833724 116688101 Protein 79329 79021 transcriptional coactivator/pterin dehydratase ATGATCCACAAGCTCACATCCGAAGAACGCAAGACCCGGCTCGAAGGCCTGCCGCACTGGACGGCCGTGCCGGGCCGCGACGCGATCCAGCGCCGCCTGCGCTTCGCCGATTTCAACGAAGCGTTCGGCTTCATGACGCGCGTCGCGATCAAGGCGCAGGAGATGAACCACCATCCGGAATGGTTCAACGTGTACAACCGTGTCGACATCACGCTGTCGACTCACGACGCCGACGGCCTGACCGAACGCGACATCGAACTCGCGCGGTTCATCGACGGCGCCGCCGCGCACGCGCAACCGGGCGCCTGA MI