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Search Burkholderia and Pseudomonas databases

You may use this search function to search both Burkholderia spp. and Pseudomonas spp. annotations and/or sequences and then compare selected annotations. By default, wild cards are enabled for all searches. Please note that gene names are currently not annotated for Burkholderia species.
Note: Hint for improving your search results

Simple Search

  Search all genomes by   Explanation of Simple Search Fields ExactExplanation of Exact search   

Advanced Boolean Search of Annotations

 
Please select from one or more of these genomes: (required)
  All Genomes
Burkholderia ambifaria MC40-6
Burkholderia cenocepacia MC0-3
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia AU 1054
Burkholderia cepacia AMMD
Burkholderia mallei NCTC 10229
Burkholderia mallei SAVP1
Burkholderia mallei NCTC 10247
Burkholderia mallei ATCC 23344
Burkholderia multivorans ATCC 17616
Burkholderia phymatum STM815
Burkholderia pseudomallei 1106a
Burkholderia pseudomallei 1710b
Burkholderia pseudomallei 668
Burkholderia pseudomallei K96243
Burkholderia sp. 383
Burkholderia thailandensis E264
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400

Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa PA14
Pseudomonas aeruginosa PA7
Pseudomonas entomophila L48
Pseudomonas fluorescens PfO-1
Pseudomonas fluorescens Pf-5
Pseudomonas mendocina ymp
Pseudomonas putida F1
Pseudomonas putida KT2440
Pseudomonas stutzeri A1501
Pseudomonas syringae B728a
Pseudomonas syringae DC3000
Pseudomonas syringae 1448A
 
We discourage searches of the original Pseudomonas aeruginosa PAO1 annotation since it is not updated, however, if you wish to search it you can find it here: Pseudomonas aeruginosa PAO1 (Sep2000)
  Filter transposon mutants Explanation of Filter by Transposon Mutant search
 
Filter human homologs Explanation of Filter by Human Homolog


Specify subcellular localization(s) Explanation of Localization Classes:
All
Cytoplasmic Cytoplasmic Membrane Periplasmic Outer Membrane
Extracellular Fimbrial Flagellar Unknown/Unassigned

Specify search fields and keywords:  

 
Exact Explanation of Wildcard search
Exact Explanation of Wildcard search
Exact Explanation of Wildcard search
Exact Explanation of Wildcard search
**Fields only available in Pseudomonas strains

Search hint: We also recommend, as a complement to searching the annotations, that you search, using BLAST, for homologs to a protein of interest, to find additional genes/proteins of interest that may have annotations that don't show up in your annotation search (i.e. if you want all homologs of a particular membrane protein, but the particular membrane protein has been named differently by different Burkholderia Genome Projects). From a BLAST search you can also select genes/proteins of interest for further study, and compare them using the Compare feature with other genes/proteins you hold on your clipboard.

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